Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn5O54942 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn5O54942 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn5O54942 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.59■□□□□ 0.73
Cldn5O54942 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.59■□□□□ 0.73
Cldn5O54942 Gm6211-202ENSMUST00000167849 925 ntBASIC19.59■□□□□ 0.73
Cldn5O54942 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.59■□□□□ 0.73
Cldn5O54942 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn5O54942 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cldn5O54942 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.59■□□□□ 0.73
Cldn5O54942 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn5O54942 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn5O54942 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Cldn5O54942 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn5O54942 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cldn5O54942 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Cldn5O54942 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Cldn5O54942 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn5O54942 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn5O54942 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn5O54942 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn5O54942 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Cldn5O54942 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn5O54942 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn5O54942 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cldn5O54942 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.58■□□□□ 0.72
Cldn5O54942 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cldn5O54942 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn5O54942 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cldn5O54942 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn5O54942 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.57■□□□□ 0.72
Cldn5O54942 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn5O54942 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn5O54942 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Cldn5O54942 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn5O54942 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn5O54942 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn5O54942 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cldn5O54942 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn5O54942 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn5O54942 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn5O54942 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cldn5O54942 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn5O54942 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.56■□□□□ 0.72
Cldn5O54942 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn5O54942 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cldn5O54942 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cldn5O54942 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Cldn5O54942 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn5O54942 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn5O54942 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.55■□□□□ 0.72
Cldn5O54942 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn5O54942 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn5O54942 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Cldn5O54942 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn5O54942 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.55■□□□□ 0.72
Cldn5O54942 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn5O54942 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn5O54942 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Cldn5O54942 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn5O54942 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cldn5O54942 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn5O54942 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn5O54942 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn5O54942 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn5O54942 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn5O54942 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn5O54942 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn5O54942 Gm27011-201ENSMUST00000182352 972 ntBASIC19.54■□□□□ 0.72
Cldn5O54942 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.54■□□□□ 0.72
Cldn5O54942 Gm5408-201ENSMUST00000197998 747 ntBASIC19.54■□□□□ 0.72
Cldn5O54942 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.54■□□□□ 0.72
Cldn5O54942 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.54■□□□□ 0.72
Cldn5O54942 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cldn5O54942 Gm4968-201ENSMUST00000071458 858 ntBASIC19.54■□□□□ 0.72
Cldn5O54942 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn5O54942 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn5O54942 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cldn5O54942 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.53■□□□□ 0.72
Cldn5O54942 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.53■□□□□ 0.72
Cldn5O54942 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.53■□□□□ 0.72
Cldn5O54942 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cldn5O54942 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.53■□□□□ 0.72
Cldn5O54942 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cldn5O54942 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cldn5O54942 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Cldn5O54942 Gm12441-201ENSMUST00000121806 588 ntBASIC19.52■□□□□ 0.72
Cldn5O54942 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms