Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.01■□□□□ 0.63
ChkaO54804 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ChkaO54804 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ChkaO54804 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.01■□□□□ 0.63
ChkaO54804 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19■□□□□ 0.63
ChkaO54804 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ChkaO54804 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ChkaO54804 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ChkaO54804 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ChkaO54804 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ChkaO54804 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
ChkaO54804 Gm40848-201ENSMUST00000221998 324 ntBASIC19■□□□□ 0.63
ChkaO54804 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ChkaO54804 Dmtn-210ENSMUST00000228824 2377 ntBASIC19■□□□□ 0.63
ChkaO54804 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ChkaO54804 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ChkaO54804 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ChkaO54804 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ChkaO54804 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkaO54804 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkaO54804 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
ChkaO54804 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
ChkaO54804 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ChkaO54804 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.99■□□□□ 0.63
ChkaO54804 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.99■□□□□ 0.63
ChkaO54804 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkaO54804 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
ChkaO54804 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkaO54804 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkaO54804 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkaO54804 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkaO54804 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.99■□□□□ 0.63
ChkaO54804 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkaO54804 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkaO54804 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
ChkaO54804 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkaO54804 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.98■□□□□ 0.63
ChkaO54804 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkaO54804 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
ChkaO54804 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ChkaO54804 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkaO54804 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkaO54804 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkaO54804 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.98■□□□□ 0.63
ChkaO54804 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkaO54804 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkaO54804 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkaO54804 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ChkaO54804 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkaO54804 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkaO54804 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ChkaO54804 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkaO54804 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ChkaO54804 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkaO54804 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkaO54804 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
ChkaO54804 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.97■□□□□ 0.63
ChkaO54804 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkaO54804 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ChkaO54804 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkaO54804 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ChkaO54804 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ChkaO54804 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.96■□□□□ 0.63
ChkaO54804 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ChkaO54804 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ChkaO54804 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
ChkaO54804 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ChkaO54804 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ChkaO54804 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.96■□□□□ 0.63
ChkaO54804 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ChkaO54804 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ChkaO54804 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ChkaO54804 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ChkaO54804 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ChkaO54804 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ChkaO54804 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ChkaO54804 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ChkaO54804 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ChkaO54804 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ChkaO54804 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ChkaO54804 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ChkaO54804 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ChkaO54804 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ChkaO54804 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ChkaO54804 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ChkaO54804 Gm43017-201ENSMUST00000198296 752 ntBASIC18.94■□□□□ 0.62
ChkaO54804 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ChkaO54804 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ChkaO54804 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ChkaO54804 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ChkaO54804 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ChkaO54804 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ChkaO54804 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ChkaO54804 Gm26833-201ENSMUST00000180899 440 ntBASIC18.93■□□□□ 0.62
ChkaO54804 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.93■□□□□ 0.62
ChkaO54804 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.93■□□□□ 0.62
ChkaO54804 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ChkaO54804 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ChkaO54804 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ChkaO54804 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms