Protein–RNA interactions for Protein: O35943

Fxn, Frataxin, mitochondrial, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FxnO35943 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
FxnO35943 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
FxnO35943 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.42■□□□□ 0.38
FxnO35943 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FxnO35943 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.42■□□□□ 0.38
FxnO35943 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
FxnO35943 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FxnO35943 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FxnO35943 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.42■□□□□ 0.38
FxnO35943 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FxnO35943 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FxnO35943 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
FxnO35943 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
FxnO35943 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
FxnO35943 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.42■□□□□ 0.38
FxnO35943 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FxnO35943 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.42■□□□□ 0.38
FxnO35943 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
FxnO35943 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
FxnO35943 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
FxnO35943 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FxnO35943 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FxnO35943 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FxnO35943 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
FxnO35943 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FxnO35943 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
FxnO35943 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
FxnO35943 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FxnO35943 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
FxnO35943 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.41■□□□□ 0.38
FxnO35943 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FxnO35943 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FxnO35943 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FxnO35943 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
FxnO35943 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
FxnO35943 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FxnO35943 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FxnO35943 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
FxnO35943 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FxnO35943 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FxnO35943 Gm7860-201ENSMUST00000121190 879 ntBASIC17.4■□□□□ 0.38
FxnO35943 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FxnO35943 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
FxnO35943 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
FxnO35943 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
FxnO35943 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
FxnO35943 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FxnO35943 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
FxnO35943 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FxnO35943 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
FxnO35943 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
FxnO35943 BC021767-201ENSMUST00000126387 1716 ntBASIC17.39■□□□□ 0.37
FxnO35943 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FxnO35943 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
FxnO35943 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
FxnO35943 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.39■□□□□ 0.37
FxnO35943 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FxnO35943 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FxnO35943 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
FxnO35943 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
FxnO35943 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FxnO35943 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FxnO35943 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FxnO35943 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FxnO35943 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.38■□□□□ 0.37
FxnO35943 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.38■□□□□ 0.37
FxnO35943 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
FxnO35943 Gm43017-201ENSMUST00000198296 752 ntBASIC17.38■□□□□ 0.37
FxnO35943 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.38■□□□□ 0.37
FxnO35943 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
FxnO35943 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
FxnO35943 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FxnO35943 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FxnO35943 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FxnO35943 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.38■□□□□ 0.37
FxnO35943 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FxnO35943 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FxnO35943 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FxnO35943 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FxnO35943 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FxnO35943 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FxnO35943 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FxnO35943 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
FxnO35943 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.37■□□□□ 0.37
FxnO35943 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FxnO35943 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
FxnO35943 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.37■□□□□ 0.37
FxnO35943 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FxnO35943 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
FxnO35943 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
FxnO35943 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FxnO35943 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.37■□□□□ 0.37
FxnO35943 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FxnO35943 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
FxnO35943 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
FxnO35943 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
FxnO35943 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.37■□□□□ 0.37
FxnO35943 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.37■□□□□ 0.37
FxnO35943 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FxnO35943 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms