Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ptch2O35595 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ptch2O35595 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ptch2O35595 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.3■□□□□ 0.68
Ptch2O35595 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ptch2O35595 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ptch2O35595 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ptch2O35595 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ptch2O35595 Iqck-206ENSMUST00000208658 2891 ntBASIC19.29■□□□□ 0.68
Ptch2O35595 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptch2O35595 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ptch2O35595 Rab3c-203ENSMUST00000224180 967 ntBASIC19.29■□□□□ 0.68
Ptch2O35595 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ptch2O35595 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptch2O35595 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ptch2O35595 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Ptch2O35595 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptch2O35595 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptch2O35595 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptch2O35595 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.28■□□□□ 0.68
Ptch2O35595 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptch2O35595 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptch2O35595 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ptch2O35595 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ptch2O35595 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ptch2O35595 Trmt13-210ENSMUST00000198454 880 ntBASIC19.28■□□□□ 0.68
Ptch2O35595 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ptch2O35595 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.28■□□□□ 0.68
Ptch2O35595 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptch2O35595 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptch2O35595 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptch2O35595 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptch2O35595 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptch2O35595 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ptch2O35595 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ptch2O35595 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptch2O35595 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ptch2O35595 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.27■□□□□ 0.68
Ptch2O35595 Gm27275-201ENSMUST00000184318 272 ntBASIC19.27■□□□□ 0.68
Ptch2O35595 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.27■□□□□ 0.68
Ptch2O35595 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
Ptch2O35595 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptch2O35595 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ptch2O35595 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Ptch2O35595 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ptch2O35595 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ptch2O35595 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptch2O35595 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptch2O35595 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ptch2O35595 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.26■□□□□ 0.67
Ptch2O35595 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptch2O35595 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptch2O35595 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptch2O35595 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ptch2O35595 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.25■□□□□ 0.67
Ptch2O35595 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ptch2O35595 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ptch2O35595 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.25■□□□□ 0.67
Ptch2O35595 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.25■□□□□ 0.67
Ptch2O35595 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ptch2O35595 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.25■□□□□ 0.67
Ptch2O35595 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptch2O35595 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ptch2O35595 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptch2O35595 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ptch2O35595 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptch2O35595 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ptch2O35595 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.24■□□□□ 0.67
Ptch2O35595 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ptch2O35595 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptch2O35595 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptch2O35595 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ptch2O35595 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptch2O35595 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.23■□□□□ 0.67
Ptch2O35595 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ptch2O35595 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.23■□□□□ 0.67
Ptch2O35595 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptch2O35595 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ptch2O35595 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ptch2O35595 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ptch2O35595 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ptch2O35595 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ptch2O35595 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.22■□□□□ 0.67
Ptch2O35595 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptch2O35595 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptch2O35595 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.22■□□□□ 0.67
Ptch2O35595 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ptch2O35595 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms