Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Clk3O35492 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk3O35492 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk3O35492 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk3O35492 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk3O35492 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk3O35492 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk3O35492 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk3O35492 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Clk3O35492 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clk3O35492 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Clk3O35492 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.85■□□□□ 0.45
Clk3O35492 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk3O35492 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.85■□□□□ 0.45
Clk3O35492 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk3O35492 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Clk3O35492 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Clk3O35492 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.85■□□□□ 0.45
Clk3O35492 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk3O35492 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk3O35492 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk3O35492 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk3O35492 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clk3O35492 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk3O35492 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk3O35492 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk3O35492 Rarb-207ENSMUST00000225921 2756 ntBASIC17.85■□□□□ 0.45
Clk3O35492 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clk3O35492 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.84■□□□□ 0.45
Clk3O35492 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.84■□□□□ 0.45
Clk3O35492 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clk3O35492 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.84■□□□□ 0.45
Clk3O35492 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clk3O35492 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clk3O35492 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.84■□□□□ 0.45
Clk3O35492 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clk3O35492 Gm43173-201ENSMUST00000202246 593 ntBASIC17.84■□□□□ 0.45
Clk3O35492 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.84■□□□□ 0.45
Clk3O35492 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Clk3O35492 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clk3O35492 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clk3O35492 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clk3O35492 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clk3O35492 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
Clk3O35492 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.83■□□□□ 0.45
Clk3O35492 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.83■□□□□ 0.45
Clk3O35492 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.83■□□□□ 0.45
Clk3O35492 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Clk3O35492 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clk3O35492 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.83■□□□□ 0.45
Clk3O35492 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clk3O35492 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clk3O35492 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clk3O35492 Gm11421-201ENSMUST00000122124 294 ntBASIC17.83■□□□□ 0.44
Clk3O35492 Gm43017-201ENSMUST00000198296 752 ntBASIC17.83■□□□□ 0.44
Clk3O35492 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.83■□□□□ 0.44
Clk3O35492 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.83■□□□□ 0.44
Clk3O35492 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.83■□□□□ 0.44
Clk3O35492 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Clk3O35492 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Clk3O35492 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clk3O35492 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clk3O35492 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clk3O35492 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Clk3O35492 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Clk3O35492 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.82■□□□□ 0.44
Clk3O35492 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.82■□□□□ 0.44
Clk3O35492 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Clk3O35492 Smad6-203ENSMUST00000179458 273 ntBASIC17.82■□□□□ 0.44
Clk3O35492 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Gm26833-201ENSMUST00000180899 440 ntBASIC17.82■□□□□ 0.44
Clk3O35492 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Clk3O35492 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clk3O35492 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk3O35492 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Clk3O35492 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk3O35492 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk3O35492 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk3O35492 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clk3O35492 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk3O35492 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.81■□□□□ 0.44
Clk3O35492 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.81■□□□□ 0.44
Clk3O35492 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.81■□□□□ 0.44
Clk3O35492 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk3O35492 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clk3O35492 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.81■□□□□ 0.44
Clk3O35492 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clk3O35492 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms