Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clcn6O35454 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.77■□□□□ 0.76
Clcn6O35454 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Clcn6O35454 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Clcn6O35454 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC19.77■□□□□ 0.76
Clcn6O35454 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Clcn6O35454 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Clcn6O35454 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clcn6O35454 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.77■□□□□ 0.76
Clcn6O35454 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clcn6O35454 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Clcn6O35454 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn6O35454 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn6O35454 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn6O35454 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.76■□□□□ 0.75
Clcn6O35454 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn6O35454 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Clcn6O35454 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.76■□□□□ 0.75
Clcn6O35454 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Clcn6O35454 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn6O35454 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.76■□□□□ 0.75
Clcn6O35454 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Clcn6O35454 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn6O35454 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn6O35454 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clcn6O35454 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Clcn6O35454 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Clcn6O35454 BC021767-201ENSMUST00000126387 1716 ntBASIC19.76■□□□□ 0.75
Clcn6O35454 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.76■□□□□ 0.75
Clcn6O35454 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Clcn6O35454 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn6O35454 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn6O35454 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn6O35454 Gm13366-201ENSMUST00000122198 970 ntBASIC19.75■□□□□ 0.75
Clcn6O35454 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn6O35454 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn6O35454 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn6O35454 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn6O35454 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn6O35454 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clcn6O35454 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn6O35454 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn6O35454 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn6O35454 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn6O35454 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn6O35454 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clcn6O35454 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Clcn6O35454 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn6O35454 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.74■□□□□ 0.75
Clcn6O35454 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn6O35454 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn6O35454 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn6O35454 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.74■□□□□ 0.75
Clcn6O35454 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn6O35454 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.74■□□□□ 0.75
Clcn6O35454 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.74■□□□□ 0.75
Clcn6O35454 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn6O35454 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.74■□□□□ 0.75
Clcn6O35454 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Clcn6O35454 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Clcn6O35454 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Clcn6O35454 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Clcn6O35454 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.73■□□□□ 0.75
Clcn6O35454 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC19.73■□□□□ 0.75
Clcn6O35454 Gm37002-201ENSMUST00000194560 373 ntBASIC19.73■□□□□ 0.75
Clcn6O35454 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.73■□□□□ 0.75
Clcn6O35454 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.73■□□□□ 0.75
Clcn6O35454 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn6O35454 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Clcn6O35454 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Clcn6O35454 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Clcn6O35454 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.72■□□□□ 0.75
Clcn6O35454 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Gm27454-201ENSMUST00000185090 204 ntBASIC19.72■□□□□ 0.75
Clcn6O35454 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 AC159246.1-201ENSMUST00000214478 249 ntBASIC19.72■□□□□ 0.75
Clcn6O35454 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn6O35454 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms