Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.35■□□□□ 0.37
Capn1O35350 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Capn1O35350 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.35■□□□□ 0.37
Capn1O35350 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Capn1O35350 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.35■□□□□ 0.37
Capn1O35350 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Capn1O35350 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.35■□□□□ 0.37
Capn1O35350 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.35■□□□□ 0.37
Capn1O35350 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Capn1O35350 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn1O35350 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn1O35350 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn1O35350 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Capn1O35350 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Capn1O35350 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.34■□□□□ 0.37
Capn1O35350 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Capn1O35350 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.34■□□□□ 0.37
Capn1O35350 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Capn1O35350 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Capn1O35350 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Capn1O35350 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.34■□□□□ 0.37
Capn1O35350 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Capn1O35350 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Capn1O35350 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.34■□□□□ 0.37
Capn1O35350 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.34■□□□□ 0.37
Capn1O35350 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Capn1O35350 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Capn1O35350 AA386476-201ENSMUST00000098781 1665 ntBASIC17.34■□□□□ 0.37
Capn1O35350 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Capn1O35350 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Capn1O35350 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Capn1O35350 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Capn1O35350 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Capn1O35350 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Capn1O35350 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Capn1O35350 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Capn1O35350 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Capn1O35350 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Capn1O35350 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Capn1O35350 Gm38205-201ENSMUST00000192243 258 ntBASIC17.33■□□□□ 0.36
Capn1O35350 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Capn1O35350 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Capn1O35350 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Capn1O35350 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Capn1O35350 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Capn1O35350 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Capn1O35350 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capn1O35350 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capn1O35350 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Capn1O35350 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Capn1O35350 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capn1O35350 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capn1O35350 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capn1O35350 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capn1O35350 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capn1O35350 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.32■□□□□ 0.36
Capn1O35350 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capn1O35350 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Capn1O35350 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Capn1O35350 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capn1O35350 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Capn1O35350 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Capn1O35350 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Capn1O35350 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Capn1O35350 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capn1O35350 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.31■□□□□ 0.36
Capn1O35350 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Capn1O35350 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.31■□□□□ 0.36
Capn1O35350 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.31■□□□□ 0.36
Capn1O35350 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capn1O35350 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capn1O35350 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capn1O35350 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capn1O35350 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capn1O35350 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capn1O35350 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Capn1O35350 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Capn1O35350 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capn1O35350 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capn1O35350 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.31■□□□□ 0.36
Capn1O35350 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Capn1O35350 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capn1O35350 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Capn1O35350 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capn1O35350 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capn1O35350 Mir5133-201ENSMUST00000174955 77 ntBASIC17.3■□□□□ 0.36
Capn1O35350 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.3■□□□□ 0.36
Capn1O35350 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Capn1O35350 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capn1O35350 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Capn1O35350 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Capn1O35350 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capn1O35350 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Capn1O35350 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Capn1O35350 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Capn1O35350 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Capn1O35350 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capn1O35350 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Capn1O35350 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Capn1O35350 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms