Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cx3cl1O35188 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cx3cl1O35188 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cx3cl1O35188 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cx3cl1O35188 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cx3cl1O35188 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cx3cl1O35188 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cl1O35188 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cl1O35188 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cl1O35188 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cl1O35188 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cl1O35188 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Cx3cl1O35188 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cl1O35188 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cx3cl1O35188 Gm7291-201ENSMUST00000199147 382 ntBASIC17.6■□□□□ 0.41
Cx3cl1O35188 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.6■□□□□ 0.41
Cx3cl1O35188 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Cx3cl1O35188 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.6■□□□□ 0.41
Cx3cl1O35188 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cl1O35188 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cx3cl1O35188 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cl1O35188 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cl1O35188 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cl1O35188 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cl1O35188 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cx3cl1O35188 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cl1O35188 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cl1O35188 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.59■□□□□ 0.41
Cx3cl1O35188 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cl1O35188 Gm13534-201ENSMUST00000121169 513 ntBASIC17.59■□□□□ 0.41
Cx3cl1O35188 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.59■□□□□ 0.41
Cx3cl1O35188 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cl1O35188 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.59■□□□□ 0.41
Cx3cl1O35188 Gm7514-201ENSMUST00000209475 934 ntBASIC17.59■□□□□ 0.41
Cx3cl1O35188 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cl1O35188 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cx3cl1O35188 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Cx3cl1O35188 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cl1O35188 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cx3cl1O35188 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.58■□□□□ 0.41
Cx3cl1O35188 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cx3cl1O35188 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.58■□□□□ 0.4
Cx3cl1O35188 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cx3cl1O35188 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cx3cl1O35188 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Cx3cl1O35188 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cx3cl1O35188 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cx3cl1O35188 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cx3cl1O35188 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cx3cl1O35188 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cx3cl1O35188 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cx3cl1O35188 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cl1O35188 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cx3cl1O35188 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cx3cl1O35188 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cx3cl1O35188 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.56■□□□□ 0.4
Cx3cl1O35188 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cx3cl1O35188 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cx3cl1O35188 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.55■□□□□ 0.4
Cx3cl1O35188 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cx3cl1O35188 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cx3cl1O35188 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cx3cl1O35188 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.55■□□□□ 0.4
Cx3cl1O35188 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cx3cl1O35188 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.55■□□□□ 0.4
Cx3cl1O35188 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.55■□□□□ 0.4
Cx3cl1O35188 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.55■□□□□ 0.4
Cx3cl1O35188 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cx3cl1O35188 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cx3cl1O35188 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cx3cl1O35188 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cx3cl1O35188 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Cx3cl1O35188 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cx3cl1O35188 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cx3cl1O35188 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms