Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ebf3O08791 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Ebf3O08791 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 Gm7860-201ENSMUST00000121190 879 ntBASIC19.51■□□□□ 0.71
Ebf3O08791 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ebf3O08791 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ebf3O08791 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf3O08791 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.5■□□□□ 0.71
Ebf3O08791 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf3O08791 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf3O08791 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf3O08791 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.5■□□□□ 0.71
Ebf3O08791 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ebf3O08791 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.5■□□□□ 0.71
Ebf3O08791 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Ebf3O08791 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.5■□□□□ 0.71
Ebf3O08791 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ebf3O08791 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ebf3O08791 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ebf3O08791 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf3O08791 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf3O08791 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.49■□□□□ 0.71
Ebf3O08791 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ebf3O08791 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.49■□□□□ 0.71
Ebf3O08791 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ebf3O08791 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf3O08791 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ebf3O08791 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ebf3O08791 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ebf3O08791 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf3O08791 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf3O08791 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf3O08791 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf3O08791 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf3O08791 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ebf3O08791 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf3O08791 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf3O08791 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf3O08791 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.47■□□□□ 0.71
Ebf3O08791 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf3O08791 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ebf3O08791 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf3O08791 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf3O08791 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf3O08791 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ebf3O08791 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.47■□□□□ 0.71
Ebf3O08791 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf3O08791 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf3O08791 Gm13168-201ENSMUST00000121771 632 ntBASIC19.46■□□□□ 0.71
Ebf3O08791 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.46■□□□□ 0.71
Ebf3O08791 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.46■□□□□ 0.71
Ebf3O08791 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.46■□□□□ 0.71
Ebf3O08791 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.46■□□□□ 0.71
Ebf3O08791 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.46■□□□□ 0.71
Ebf3O08791 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf3O08791 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf3O08791 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ebf3O08791 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ebf3O08791 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ebf3O08791 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.45■□□□□ 0.7
Ebf3O08791 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.45■□□□□ 0.7
Ebf3O08791 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ebf3O08791 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Ebf3O08791 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ebf3O08791 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ebf3O08791 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.44■□□□□ 0.7
Ebf3O08791 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.44■□□□□ 0.7
Ebf3O08791 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 Gm37856-201ENSMUST00000191634 999 ntBASIC19.44■□□□□ 0.7
Ebf3O08791 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.44■□□□□ 0.7
Ebf3O08791 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ebf3O08791 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.43■□□□□ 0.7
Ebf3O08791 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf3O08791 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ebf3O08791 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Ebf3O08791 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.43■□□□□ 0.7
Ebf3O08791 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms