Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.68■□□□□ 0.26
Raet1aO08602 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Raet1aO08602 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.67■□□□□ 0.26
Raet1aO08602 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Raet1aO08602 Gm9988-201ENSMUST00000069786 435 ntBASIC16.67■□□□□ 0.26
Raet1aO08602 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.67■□□□□ 0.26
Raet1aO08602 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Raet1aO08602 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.67■□□□□ 0.26
Raet1aO08602 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Raet1aO08602 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Raet1aO08602 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Raet1aO08602 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Raet1aO08602 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Raet1aO08602 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Raet1aO08602 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Raet1aO08602 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Raet1aO08602 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Raet1aO08602 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Raet1aO08602 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.66■□□□□ 0.26
Raet1aO08602 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Raet1aO08602 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Raet1aO08602 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Raet1aO08602 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Raet1aO08602 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Raet1aO08602 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.65■□□□□ 0.26
Raet1aO08602 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.65■□□□□ 0.26
Raet1aO08602 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.65■□□□□ 0.26
Raet1aO08602 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.65■□□□□ 0.26
Raet1aO08602 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.65■□□□□ 0.26
Raet1aO08602 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Raet1aO08602 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Raet1aO08602 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Raet1aO08602 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.65■□□□□ 0.26
Raet1aO08602 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Raet1aO08602 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Raet1aO08602 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.64■□□□□ 0.26
Raet1aO08602 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.64■□□□□ 0.25
Raet1aO08602 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Raet1aO08602 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Raet1aO08602 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raet1aO08602 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raet1aO08602 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raet1aO08602 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raet1aO08602 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Raet1aO08602 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Raet1aO08602 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Raet1aO08602 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raet1aO08602 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Raet1aO08602 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raet1aO08602 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raet1aO08602 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Raet1aO08602 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raet1aO08602 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.63■□□□□ 0.25
Raet1aO08602 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Raet1aO08602 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.63■□□□□ 0.25
Raet1aO08602 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.63■□□□□ 0.25
Raet1aO08602 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raet1aO08602 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raet1aO08602 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raet1aO08602 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Raet1aO08602 Reep4-203ENSMUST00000226563 1444 ntBASIC16.62■□□□□ 0.25
Raet1aO08602 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raet1aO08602 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.62■□□□□ 0.25
Raet1aO08602 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raet1aO08602 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Raet1aO08602 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Raet1aO08602 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raet1aO08602 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.62■□□□□ 0.25
Raet1aO08602 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raet1aO08602 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raet1aO08602 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Raet1aO08602 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Raet1aO08602 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.62■□□□□ 0.25
Raet1aO08602 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Raet1aO08602 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms