Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sgo2bJ3QMK1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.77■□□□□ 0.6
Sgo2bJ3QMK1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sgo2bJ3QMK1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sgo2bJ3QMK1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sgo2bJ3QMK1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sgo2bJ3QMK1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sgo2bJ3QMK1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sgo2bJ3QMK1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.76■□□□□ 0.59
Sgo2bJ3QMK1 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.76■□□□□ 0.59
Sgo2bJ3QMK1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sgo2bJ3QMK1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sgo2bJ3QMK1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sgo2bJ3QMK1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.76■□□□□ 0.59
Sgo2bJ3QMK1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sgo2bJ3QMK1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sgo2bJ3QMK1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sgo2bJ3QMK1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Sgo2bJ3QMK1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sgo2bJ3QMK1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sgo2bJ3QMK1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Gm38205-201ENSMUST00000192243 258 ntBASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sgo2bJ3QMK1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sgo2bJ3QMK1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sgo2bJ3QMK1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms