Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc188F6WEU2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc188F6WEU2 Flg-201ENSMUST00000050758 1488 ntBASIC19.23■□□□□ 0.67
Ccdc188F6WEU2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc188F6WEU2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc188F6WEU2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc188F6WEU2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc188F6WEU2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ccdc188F6WEU2 Gm7153-201ENSMUST00000117092 455 ntBASIC19.22■□□□□ 0.67
Ccdc188F6WEU2 Gm42545-201ENSMUST00000202755 922 ntBASIC19.22■□□□□ 0.67
Ccdc188F6WEU2 Gm45058-201ENSMUST00000205810 766 ntBASIC19.22■□□□□ 0.67
Ccdc188F6WEU2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc188F6WEU2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc188F6WEU2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc188F6WEU2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Ccdc188F6WEU2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc188F6WEU2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.21■□□□□ 0.67
Ccdc188F6WEU2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.21■□□□□ 0.67
Ccdc188F6WEU2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc188F6WEU2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc188F6WEU2 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.21■□□□□ 0.67
Ccdc188F6WEU2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc188F6WEU2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc188F6WEU2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc188F6WEU2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc188F6WEU2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc188F6WEU2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc188F6WEU2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc188F6WEU2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 Gm43514-201ENSMUST00000198852 424 ntBASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc188F6WEU2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc188F6WEU2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc188F6WEU2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc188F6WEU2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc188F6WEU2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccdc188F6WEU2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc188F6WEU2 Gm18025-201ENSMUST00000221733 862 ntBASIC19.18■□□□□ 0.66
Ccdc188F6WEU2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc188F6WEU2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.17■□□□□ 0.66
Ccdc188F6WEU2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc188F6WEU2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc188F6WEU2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc188F6WEU2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc188F6WEU2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc188F6WEU2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc188F6WEU2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Ccdc188F6WEU2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc188F6WEU2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc188F6WEU2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc188F6WEU2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc188F6WEU2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc188F6WEU2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc188F6WEU2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc188F6WEU2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc188F6WEU2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.16■□□□□ 0.66
Ccdc188F6WEU2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc188F6WEU2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc188F6WEU2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccdc188F6WEU2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ccdc188F6WEU2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc188F6WEU2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc188F6WEU2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc188F6WEU2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc188F6WEU2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc188F6WEU2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc188F6WEU2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Ccdc188F6WEU2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc188F6WEU2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc188F6WEU2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc188F6WEU2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc188F6WEU2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc188F6WEU2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc188F6WEU2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc188F6WEU2 Gm37292-201ENSMUST00000192062 758 ntBASIC19.14■□□□□ 0.65
Ccdc188F6WEU2 Mzt1-203ENSMUST00000227948 952 ntBASIC19.14■□□□□ 0.65
Ccdc188F6WEU2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc188F6WEU2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc188F6WEU2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc188F6WEU2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc188F6WEU2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc188F6WEU2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc188F6WEU2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc188F6WEU2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc188F6WEU2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc188F6WEU2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc188F6WEU2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc188F6WEU2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc188F6WEU2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc188F6WEU2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms