Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sptbn4E9PX29 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sptbn4E9PX29 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Gm25016-201ENSMUST00000158399 131 ntBASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Gm17661-201ENSMUST00000170317 270 ntBASIC17.07■□□□□ 0.32
Sptbn4E9PX29 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sptbn4E9PX29 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn4E9PX29 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn4E9PX29 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn4E9PX29 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn4E9PX29 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn4E9PX29 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sptbn4E9PX29 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sptbn4E9PX29 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Gm43183-201ENSMUST00000200632 547 ntBASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.05■□□□□ 0.32
Sptbn4E9PX29 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sptbn4E9PX29 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sptbn4E9PX29 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.04■□□□□ 0.32
Sptbn4E9PX29 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.04■□□□□ 0.32
Sptbn4E9PX29 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sptbn4E9PX29 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sptbn4E9PX29 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sptbn4E9PX29 AA386476-201ENSMUST00000098781 1665 ntBASIC17.04■□□□□ 0.32
Sptbn4E9PX29 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.04■□□□□ 0.32
Sptbn4E9PX29 Gm6443-201ENSMUST00000203599 874 ntBASIC17.04■□□□□ 0.32
Sptbn4E9PX29 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Sptbn4E9PX29 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sptbn4E9PX29 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn4E9PX29 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn4E9PX29 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn4E9PX29 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.03■□□□□ 0.32
Sptbn4E9PX29 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn4E9PX29 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.03■□□□□ 0.32
Sptbn4E9PX29 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn4E9PX29 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn4E9PX29 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn4E9PX29 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.03■□□□□ 0.32
Sptbn4E9PX29 Mzt1-203ENSMUST00000227948 952 ntBASIC17.03■□□□□ 0.32
Sptbn4E9PX29 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sptbn4E9PX29 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sptbn4E9PX29 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sptbn4E9PX29 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sptbn4E9PX29 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Sptbn4E9PX29 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sptbn4E9PX29 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Sptbn4E9PX29 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sptbn4E9PX29 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn4E9PX29 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn4E9PX29 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.01■□□□□ 0.31
Sptbn4E9PX29 Gm17807-201ENSMUST00000186869 298 ntBASIC17.01■□□□□ 0.31
Sptbn4E9PX29 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn4E9PX29 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn4E9PX29 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn4E9PX29 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn4E9PX29 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn4E9PX29 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn4E9PX29 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.01■□□□□ 0.31
Sptbn4E9PX29 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sptbn4E9PX29 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sptbn4E9PX29 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sptbn4E9PX29 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17■□□□□ 0.31
Sptbn4E9PX29 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sptbn4E9PX29 Il17rd-202ENSMUST00000223942 2186 ntBASIC17■□□□□ 0.31
Sptbn4E9PX29 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sptbn4E9PX29 Gm42545-201ENSMUST00000202755 922 ntBASIC17■□□□□ 0.31
Sptbn4E9PX29 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17■□□□□ 0.31
Sptbn4E9PX29 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sptbn4E9PX29 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms