Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Herc3A6H6S0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Herc3A6H6S0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Herc3A6H6S0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Herc3A6H6S0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Herc3A6H6S0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Herc3A6H6S0 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Herc3A6H6S0 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.84■□□□□ 0.93
Herc3A6H6S0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Herc3A6H6S0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Herc3A6H6S0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Herc3A6H6S0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
Herc3A6H6S0 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.84■□□□□ 0.93
Herc3A6H6S0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Herc3A6H6S0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Herc3A6H6S0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.83■□□□□ 0.93
Herc3A6H6S0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.83■□□□□ 0.93
Herc3A6H6S0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Herc3A6H6S0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Herc3A6H6S0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Herc3A6H6S0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Herc3A6H6S0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Herc3A6H6S0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Herc3A6H6S0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Herc3A6H6S0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Herc3A6H6S0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Herc3A6H6S0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Herc3A6H6S0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Herc3A6H6S0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Herc3A6H6S0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Herc3A6H6S0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Herc3A6H6S0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Herc3A6H6S0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Herc3A6H6S0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Herc3A6H6S0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Herc3A6H6S0 Gm13146-201ENSMUST00000118508 780 ntBASIC20.81■□□□□ 0.92
Herc3A6H6S0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Herc3A6H6S0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.81■□□□□ 0.92
Herc3A6H6S0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Herc3A6H6S0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Herc3A6H6S0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Herc3A6H6S0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Herc3A6H6S0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Herc3A6H6S0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Herc3A6H6S0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Herc3A6H6S0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.8■□□□□ 0.92
Herc3A6H6S0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.8■□□□□ 0.92
Herc3A6H6S0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Herc3A6H6S0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Herc3A6H6S0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Herc3A6H6S0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Herc3A6H6S0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herc3A6H6S0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herc3A6H6S0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herc3A6H6S0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herc3A6H6S0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herc3A6H6S0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Herc3A6H6S0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Herc3A6H6S0 Reep4-203ENSMUST00000226563 1444 ntBASIC20.78■□□□□ 0.92
Herc3A6H6S0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Herc3A6H6S0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.78■□□□□ 0.92
Herc3A6H6S0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Herc3A6H6S0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc3A6H6S0 Gm9988-201ENSMUST00000069786 435 ntBASIC20.78■□□□□ 0.92
Herc3A6H6S0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc3A6H6S0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc3A6H6S0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.78■□□□□ 0.92
Herc3A6H6S0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Herc3A6H6S0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Herc3A6H6S0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc3A6H6S0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc3A6H6S0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc3A6H6S0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc3A6H6S0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc3A6H6S0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc3A6H6S0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc3A6H6S0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc3A6H6S0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc3A6H6S0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Herc3A6H6S0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Herc3A6H6S0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herc3A6H6S0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Herc3A6H6S0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Herc3A6H6S0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herc3A6H6S0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Herc3A6H6S0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Herc3A6H6S0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herc3A6H6S0 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.76■□□□□ 0.91
Herc3A6H6S0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herc3A6H6S0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Herc3A6H6S0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herc3A6H6S0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herc3A6H6S0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.75■□□□□ 0.91
Herc3A6H6S0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.75■□□□□ 0.91
Herc3A6H6S0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Herc3A6H6S0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.75■□□□□ 0.91
Herc3A6H6S0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Herc3A6H6S0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herc3A6H6S0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Herc3A6H6S0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms