Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a4A2AX52 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Col6a4A2AX52 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.85■□□□□ 0.13
Col6a4A2AX52 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a4A2AX52 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a4A2AX52 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.85■□□□□ 0.13
Col6a4A2AX52 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Col6a4A2AX52 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a4A2AX52 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a4A2AX52 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a4A2AX52 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a4A2AX52 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Col6a4A2AX52 Gm13158-201ENSMUST00000122007 736 ntBASIC15.85■□□□□ 0.13
Col6a4A2AX52 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a4A2AX52 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a4A2AX52 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a4A2AX52 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.85■□□□□ 0.13
Col6a4A2AX52 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a4A2AX52 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.84■□□□□ 0.13
Col6a4A2AX52 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Col6a4A2AX52 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.84■□□□□ 0.13
Col6a4A2AX52 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a4A2AX52 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a4A2AX52 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a4A2AX52 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a4A2AX52 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Col6a4A2AX52 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.84■□□□□ 0.13
Col6a4A2AX52 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a4A2AX52 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col6a4A2AX52 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.83■□□□□ 0.12
Col6a4A2AX52 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a4A2AX52 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.83■□□□□ 0.12
Col6a4A2AX52 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a4A2AX52 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Col6a4A2AX52 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.83■□□□□ 0.12
Col6a4A2AX52 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Col6a4A2AX52 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a4A2AX52 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a4A2AX52 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.83■□□□□ 0.12
Col6a4A2AX52 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a4A2AX52 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.83■□□□□ 0.12
Col6a4A2AX52 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Col6a4A2AX52 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a4A2AX52 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a4A2AX52 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Col6a4A2AX52 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a4A2AX52 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a4A2AX52 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a4A2AX52 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.82■□□□□ 0.12
Col6a4A2AX52 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a4A2AX52 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a4A2AX52 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a4A2AX52 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a4A2AX52 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a4A2AX52 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a4A2AX52 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a4A2AX52 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.82■□□□□ 0.12
Col6a4A2AX52 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col6a4A2AX52 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Col6a4A2AX52 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a4A2AX52 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a4A2AX52 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Col6a4A2AX52 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col6a4A2AX52 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.81■□□□□ 0.12
Col6a4A2AX52 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col6a4A2AX52 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col6a4A2AX52 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Col6a4A2AX52 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.81■□□□□ 0.12
Col6a4A2AX52 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.8■□□□□ 0.12
Col6a4A2AX52 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a4A2AX52 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Gm2399-201ENSMUST00000104944 225 ntBASIC15.8■□□□□ 0.12
Col6a4A2AX52 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Gm10231-201ENSMUST00000181584 441 ntBASIC15.8■□□□□ 0.12
Col6a4A2AX52 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Gm10175-202ENSMUST00000208752 441 ntBASIC15.8■□□□□ 0.12
Col6a4A2AX52 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col6a4A2AX52 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.79■□□□□ 0.12
Col6a4A2AX52 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col6a4A2AX52 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms