Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ubr4A2AN08 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ubr4A2AN08 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ubr4A2AN08 Timm23-208ENSMUST00000226683 750 ntBASIC10.08□□□□□ -0.8
Ubr4A2AN08 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.08□□□□□ -0.8
Ubr4A2AN08 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Ubr4A2AN08 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Ubr4A2AN08 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC10.08□□□□□ -0.8
Ubr4A2AN08 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Ubr4A2AN08 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ubr4A2AN08 Gm43332-201ENSMUST00000202511 1044 ntBASIC10.07□□□□□ -0.8
Ubr4A2AN08 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ubr4A2AN08 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ubr4A2AN08 Gm42418-201ENSMUST00000182010 1831 ntBASIC10.07□□□□□ -0.8
Ubr4A2AN08 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ubr4A2AN08 Gm45058-201ENSMUST00000205810 766 ntBASIC10.07□□□□□ -0.8
Ubr4A2AN08 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC10.07□□□□□ -0.8
Ubr4A2AN08 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ubr4A2AN08 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ubr4A2AN08 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ubr4A2AN08 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC10.07□□□□□ -0.8
Ubr4A2AN08 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ubr4A2AN08 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Ubr4A2AN08 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Ubr4A2AN08 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Ubr4A2AN08 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Gm43575-201ENSMUST00000196420 516 ntBASIC10.06□□□□□ -0.8
Ubr4A2AN08 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Wnt10b-205ENSMUST00000226846 1204 ntBASIC10.06□□□□□ -0.8
Ubr4A2AN08 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ubr4A2AN08 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Gm27704-201ENSMUST00000185094 107 ntBASIC10.05□□□□□ -0.8
Ubr4A2AN08 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ubr4A2AN08 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC10.05□□□□□ -0.8
Ubr4A2AN08 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ubr4A2AN08 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Gm27702-201ENSMUST00000184512 56 ntBASIC10.05□□□□□ -0.8
Ubr4A2AN08 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC10.05□□□□□ -0.8
Ubr4A2AN08 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ubr4A2AN08 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Ubr4A2AN08 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms