Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Shroom2A2ALU4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC30.16■■■□□ 2.42
Shroom2A2ALU4 Gm26971-201ENSMUST00000182423 1072 ntBASIC30.16■■■□□ 2.42
Shroom2A2ALU4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Shroom2A2ALU4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Shroom2A2ALU4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Shroom2A2ALU4 Gm7712-202ENSMUST00000222331 1510 ntBASIC30.15■■■□□ 2.42
Shroom2A2ALU4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC30.15■■■□□ 2.42
Shroom2A2ALU4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
Shroom2A2ALU4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Shroom2A2ALU4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Shroom2A2ALU4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Shroom2A2ALU4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Shroom2A2ALU4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Shroom2A2ALU4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Shroom2A2ALU4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Shroom2A2ALU4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
Shroom2A2ALU4 AC134329.2-201ENSMUST00000217897 428 ntBASIC30.14■■■□□ 2.42
Shroom2A2ALU4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Shroom2A2ALU4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Shroom2A2ALU4 Gm6802-201ENSMUST00000167843 1983 ntBASIC30.13■■■□□ 2.41
Shroom2A2ALU4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Shroom2A2ALU4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Shroom2A2ALU4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Shroom2A2ALU4 Flg-201ENSMUST00000050758 1488 ntBASIC30.13■■■□□ 2.41
Shroom2A2ALU4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 AA386476-201ENSMUST00000098781 1665 ntBASIC30.12■■■□□ 2.41
Shroom2A2ALU4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC30.12■■■□□ 2.41
Shroom2A2ALU4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Shroom2A2ALU4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Shroom2A2ALU4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Shroom2A2ALU4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Shroom2A2ALU4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Shroom2A2ALU4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
Shroom2A2ALU4 Gm18025-201ENSMUST00000221733 862 ntBASIC30.1■■■□□ 2.41
Shroom2A2ALU4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Shroom2A2ALU4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC30.09■■■□□ 2.41
Shroom2A2ALU4 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
Shroom2A2ALU4 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
Shroom2A2ALU4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Shroom2A2ALU4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Shroom2A2ALU4 Gm18669-201ENSMUST00000216049 778 ntBASIC30.09■■■□□ 2.41
Shroom2A2ALU4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
Shroom2A2ALU4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Shroom2A2ALU4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
Shroom2A2ALU4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Shroom2A2ALU4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Shroom2A2ALU4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Shroom2A2ALU4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Shroom2A2ALU4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
Shroom2A2ALU4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Shroom2A2ALU4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Shroom2A2ALU4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Shroom2A2ALU4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Shroom2A2ALU4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Shroom2A2ALU4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
Shroom2A2ALU4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC30.07■■■□□ 2.4
Shroom2A2ALU4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC30.07■■■□□ 2.4
Shroom2A2ALU4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Shroom2A2ALU4 Gm17807-201ENSMUST00000186869 298 ntBASIC30.07■■■□□ 2.4
Shroom2A2ALU4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC30.07■■■□□ 2.4
Shroom2A2ALU4 Gm6443-201ENSMUST00000203599 874 ntBASIC30.07■■■□□ 2.4
Shroom2A2ALU4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Shroom2A2ALU4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Shroom2A2ALU4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
Shroom2A2ALU4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Shroom2A2ALU4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Shroom2A2ALU4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
Shroom2A2ALU4 Mzt1-203ENSMUST00000227948 952 ntBASIC30.06■■■□□ 2.4
Shroom2A2ALU4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Shroom2A2ALU4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Shroom2A2ALU4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC30.05■■■□□ 2.4
Shroom2A2ALU4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
Shroom2A2ALU4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Shroom2A2ALU4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
Shroom2A2ALU4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Shroom2A2ALU4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Shroom2A2ALU4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Shroom2A2ALU4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Shroom2A2ALU4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
Shroom2A2ALU4 AW822252-206ENSMUST00000208904 237 ntBASIC30.04■■■□□ 2.4
Shroom2A2ALU4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Shroom2A2ALU4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Shroom2A2ALU4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
Shroom2A2ALU4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Shroom2A2ALU4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Shroom2A2ALU4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Shroom2A2ALU4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms