Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.75■□□□□ 0.59
Chd7A2AJK6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.75■□□□□ 0.59
Chd7A2AJK6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd7A2AJK6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd7A2AJK6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd7A2AJK6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd7A2AJK6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd7A2AJK6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd7A2AJK6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Chd7A2AJK6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chd7A2AJK6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd7A2AJK6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Chd7A2AJK6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd7A2AJK6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd7A2AJK6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chd7A2AJK6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd7A2AJK6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Chd7A2AJK6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd7A2AJK6 Gm7889-201ENSMUST00000185591 958 ntBASIC18.73■□□□□ 0.59
Chd7A2AJK6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd7A2AJK6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.73■□□□□ 0.59
Chd7A2AJK6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd7A2AJK6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd7A2AJK6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.73■□□□□ 0.59
Chd7A2AJK6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Chd7A2AJK6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd7A2AJK6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd7A2AJK6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd7A2AJK6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd7A2AJK6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd7A2AJK6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd7A2AJK6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd7A2AJK6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd7A2AJK6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd7A2AJK6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd7A2AJK6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd7A2AJK6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd7A2AJK6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd7A2AJK6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chd7A2AJK6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Chd7A2AJK6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd7A2AJK6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd7A2AJK6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.71■□□□□ 0.59
Chd7A2AJK6 Gm30025-201ENSMUST00000218555 728 ntBASIC18.71■□□□□ 0.59
Chd7A2AJK6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd7A2AJK6 Gm33142-201ENSMUST00000193913 867 ntBASIC18.71■□□□□ 0.59
Chd7A2AJK6 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.71■□□□□ 0.59
Chd7A2AJK6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.71■□□□□ 0.59
Chd7A2AJK6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd7A2AJK6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd7A2AJK6 Gm17971-201ENSMUST00000190239 806 ntBASIC18.7■□□□□ 0.58
Chd7A2AJK6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd7A2AJK6 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.7■□□□□ 0.58
Chd7A2AJK6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.7■□□□□ 0.58
Chd7A2AJK6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chd7A2AJK6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Chd7A2AJK6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chd7A2AJK6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.69■□□□□ 0.58
Chd7A2AJK6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.69■□□□□ 0.58
Chd7A2AJK6 Gm11539-201ENSMUST00000119837 557 ntBASIC18.69■□□□□ 0.58
Chd7A2AJK6 Gm13436-201ENSMUST00000120418 567 ntBASIC18.69■□□□□ 0.58
Chd7A2AJK6 Gm23634-201ENSMUST00000175071 91 ntBASIC18.69■□□□□ 0.58
Chd7A2AJK6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chd7A2AJK6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.68■□□□□ 0.58
Chd7A2AJK6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chd7A2AJK6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Chd7A2AJK6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chd7A2AJK6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.68■□□□□ 0.58
Chd7A2AJK6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms