Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.3■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Rab3c-203ENSMUST00000224180 967 ntBASIC19.3■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.29■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Gm27011-201ENSMUST00000182352 972 ntBASIC19.29■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.28■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.28■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Igkv5-43A0A0B4J1J2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.28■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Igkv5-43A0A0B4J1J2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Gm12527-201ENSMUST00000117967 564 ntBASIC19.27■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Igkv5-43A0A0B4J1J2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Igkv5-43A0A0B4J1J2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms