Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv15A0A0A6YYE3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Gm7417-201ENSMUST00000192950 473 ntBASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.61■□□□□ 0.09
Trbv15A0A0A6YYE3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv15A0A0A6YYE3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv15A0A0A6YYE3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Trbv15A0A0A6YYE3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv15A0A0A6YYE3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv15A0A0A6YYE3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv15A0A0A6YYE3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv15A0A0A6YYE3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv15A0A0A6YYE3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trbv15A0A0A6YYE3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms