Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Gm15546-201ENSMUST00000122095 826 ntBASIC12.96□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Gm22238-201ENSMUST00000175222 88 ntBASIC12.96□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Gm43759-201ENSMUST00000196925 1261 ntBASIC12.96□□□□□ -0.33
Trav13-4-dv7A0A075B6C2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Rarb-207ENSMUST00000225921 2756 ntBASIC12.96□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm5812-201ENSMUST00000061073 957 ntBASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm9959-201ENSMUST00000068277 390 ntBASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm42911-201ENSMUST00000199360 1630 ntBASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav13-4-dv7A0A075B6C2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms