Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-4-dv10A0A075B651 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-4-dv10A0A075B651 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-4-dv10A0A075B651 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-4-dv10A0A075B651 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.67□□□□□ -0.06
Trav4-4-dv10A0A075B651 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav4-4-dv10A0A075B651 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-4-dv10A0A075B651 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav4-4-dv10A0A075B651 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav4-4-dv10A0A075B651 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Golgb1-201ENSMUST00000023534 498 ntBASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.66□□□□□ -0.06
Trav4-4-dv10A0A075B651 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav4-4-dv10A0A075B651 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.64□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav4-4-dv10A0A075B651 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav4-4-dv10A0A075B651 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav4-4-dv10A0A075B651 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms