Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.36■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Gm15546-201ENSMUST00000122095 826 ntBASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Gm5812-201ENSMUST00000061073 957 ntBASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Gm9959-201ENSMUST00000068277 390 ntBASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.33■□□□□ 0.05
Trav15-2-dv6-2A0A075B650 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms