Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav13-1A0A075B644 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Gm7514-201ENSMUST00000209475 934 ntBASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav13-1A0A075B644 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav13-1A0A075B644 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13-1A0A075B644 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Trav13-1A0A075B644 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.33□□□□□ -0.27
Trav13-1A0A075B644 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13-1A0A075B644 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Gm38205-201ENSMUST00000192243 258 ntBASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-1A0A075B644 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav13-1A0A075B644 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms