Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.28■□□□□ 0.36
Trav8n-2A0A075B633 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 Gm2399-201ENSMUST00000104944 225 ntBASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 Gm715-201ENSMUST00000117865 831 ntBASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trav8n-2A0A075B633 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav8n-2A0A075B633 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.27■□□□□ 0.35
Trav8n-2A0A075B633 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav8n-2A0A075B633 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav8n-2A0A075B633 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav8n-2A0A075B633 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav8n-2A0A075B633 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8n-2A0A075B633 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8n-2A0A075B633 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8n-2A0A075B633 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8n-2A0A075B633 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8n-2A0A075B633 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav8n-2A0A075B633 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Trav8n-2A0A075B633 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav8n-2A0A075B633 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8n-2A0A075B633 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8n-2A0A075B633 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav8n-2A0A075B633 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav8n-2A0A075B633 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav8n-2A0A075B633 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav8n-2A0A075B633 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav8n-2A0A075B633 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.25■□□□□ 0.35
Trav8n-2A0A075B633 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.25■□□□□ 0.35
Trav8n-2A0A075B633 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav8n-2A0A075B633 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav8n-2A0A075B633 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Gm13158-201ENSMUST00000122007 736 ntBASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav8n-2A0A075B633 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8n-2A0A075B633 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav8n-2A0A075B633 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav8n-2A0A075B633 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8n-2A0A075B633 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav8n-2A0A075B633 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.23■□□□□ 0.35
Trav8n-2A0A075B633 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8n-2A0A075B633 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8n-2A0A075B633 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav8n-2A0A075B633 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.23■□□□□ 0.35
Trav8n-2A0A075B633 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8n-2A0A075B633 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav8n-2A0A075B633 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8n-2A0A075B633 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8n-2A0A075B633 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav8n-2A0A075B633 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8n-2A0A075B633 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.22■□□□□ 0.35
Trav8n-2A0A075B633 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav8n-2A0A075B633 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.22■□□□□ 0.35
Trav8n-2A0A075B633 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.22■□□□□ 0.35
Trav8n-2A0A075B633 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8n-2A0A075B633 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8n-2A0A075B633 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav8n-2A0A075B633 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Trav8n-2A0A075B633 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms