Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6-1A0A075B5Z8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-1A0A075B5Z8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav6-1A0A075B5Z8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-1A0A075B5Z8 Golgb1-201ENSMUST00000023534 498 ntBASIC15.11■□□□□ 0.01
Trav6-1A0A075B5Z8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-1A0A075B5Z8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-1A0A075B5Z8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-1A0A075B5Z8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-1A0A075B5Z8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-1A0A075B5Z8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-1A0A075B5Z8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6-1A0A075B5Z8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-1A0A075B5Z8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-1A0A075B5Z8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6-1A0A075B5Z8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-1A0A075B5Z8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-1A0A075B5Z8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-1A0A075B5Z8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-1A0A075B5Z8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-1A0A075B5Z8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-1A0A075B5Z8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-1A0A075B5Z8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6-1A0A075B5Z8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-1A0A075B5Z8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trav6-1A0A075B5Z8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-1A0A075B5Z8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-1A0A075B5Z8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Trav6-1A0A075B5Z8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav6-1A0A075B5Z8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-1A0A075B5Z8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav6-1A0A075B5Z8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-1A0A075B5Z8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6-1A0A075B5Z8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav6-1A0A075B5Z8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trav6-1A0A075B5Z8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Trav6-1A0A075B5Z8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6-1A0A075B5Z8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6-1A0A075B5Z8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trav6-1A0A075B5Z8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-1A0A075B5Z8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-1A0A075B5Z8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav6-1A0A075B5Z8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-1A0A075B5Z8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-1A0A075B5Z8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.08■□□□□ 0
Trav6-1A0A075B5Z8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav6-1A0A075B5Z8 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.08■□□□□ 0
Trav6-1A0A075B5Z8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trav6-1A0A075B5Z8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6-1A0A075B5Z8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6-1A0A075B5Z8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav6-1A0A075B5Z8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-1A0A075B5Z8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-1A0A075B5Z8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-1A0A075B5Z8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-1A0A075B5Z8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.06■□□□□ 0
Trav6-1A0A075B5Z8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.06■□□□□ 0
Trav6-1A0A075B5Z8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6-1A0A075B5Z8 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-1A0A075B5Z8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav6-1A0A075B5Z8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-1A0A075B5Z8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6-1A0A075B5Z8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6-1A0A075B5Z8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ 0
Trav6-1A0A075B5Z8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav6-1A0A075B5Z8 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.05■□□□□ 0
Trav6-1A0A075B5Z8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Trav6-1A0A075B5Z8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav6-1A0A075B5Z8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms