Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm27353-201ENSMUST00000184712 122 ntBASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm20587-201ENSMUST00000186367 1186 ntBASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Mrgprc7-ps-201ENSMUST00000187169 952 ntBASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm37108-201ENSMUST00000194605 626 ntBASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Mark4-ps-201ENSMUST00000196140 384 ntBASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm32834-202ENSMUST00000222417 655 ntTSL 3 BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm2915-201ENSMUST00000222565 787 ntBASIC9.84□□□□□ -0.83
Nup88Q8CEC0 AC140406.2-201ENSMUST00000227539 481 ntBASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Borcs8-201ENSMUST00000002418 810 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Olfr1239-201ENSMUST00000099780 918 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Ceacam1-202ENSMUST00000098668 1478 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Supt20-211ENSMUST00000200441 2154 ntTSL 5 BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Clcn3-205ENSMUST00000110302 3768 ntTSL 5 BASIC9.84□□□□□ -0.83
Nup88Q8CEC0 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm42995-201ENSMUST00000197047 1330 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Baalc-201ENSMUST00000163313 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 C2cd5-202ENSMUST00000111758 4062 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 AC101875.1-201ENSMUST00000222666 2223 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Pxmp4-201ENSMUST00000000896 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Abhd12b-206ENSMUST00000182927 1544 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm37409-201ENSMUST00000195811 1626 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Igkv2-112-202ENSMUST00000103319 358 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm12917-201ENSMUST00000119850 639 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm5388-201ENSMUST00000120059 1117 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm14260-201ENSMUST00000125121 260 ntTSL 5 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm13546-202ENSMUST00000138444 989 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm25455-201ENSMUST00000157946 325 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm8868-201ENSMUST00000173591 577 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm21454-201ENSMUST00000178599 1285 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm7863-201ENSMUST00000184700 805 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Scgb2b4-ps-201ENSMUST00000186705 340 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm29548-201ENSMUST00000187012 694 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm28105-201ENSMUST00000187788 694 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm37155-201ENSMUST00000192152 406 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 AC153845.1-201ENSMUST00000213596 428 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm29807-201ENSMUST00000220161 372 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 AC124736.1-201ENSMUST00000226382 419 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gstm5-201ENSMUST00000004134 945 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Snora57-201ENSMUST00000093658 148 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Gm44986-201ENSMUST00000206292 2829 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Nup88Q8CEC0 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm16050-201ENSMUST00000160626 2363 ntTSL 3 BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Skap1-201ENSMUST00000071510 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm37110-201ENSMUST00000192993 1628 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm44183-201ENSMUST00000203964 1628 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 AC156025.3-201ENSMUST00000225919 3095 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm26012-201ENSMUST00000104411 128 ntBASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Anapc15-205ENSMUST00000106978 841 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Nup88Q8CEC0 Gm12445-201ENSMUST00000117947 885 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms