Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 AC159006.3-201ENSMUST00000226918 664 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Rpl6-201ENSMUST00000031617 1270 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Pudp-201ENSMUST00000056460 1044 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Rpl21-ps12-201ENSMUST00000080061 480 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm10704-201ENSMUST00000098952 730 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gmfb-202ENSMUST00000111817 4171 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Slc2a12-201ENSMUST00000042261 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gmfb-201ENSMUST00000079314 4171 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Tcf7l2-212ENSMUST00000111659 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm9521-201ENSMUST00000206656 1516 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Ypel5-201ENSMUST00000045174 2869 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Ptprr-207ENSMUST00000155606 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Muc20-202ENSMUST00000115116 3673 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 D830032E09Rik-203ENSMUST00000189845 2092 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Zfp53-201ENSMUST00000076664 2058 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Fer-201ENSMUST00000000129 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Raet1d-202ENSMUST00000182677 1425 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm37069-201ENSMUST00000192742 4142 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Osgepl1-202ENSMUST00000114484 2283 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm43414-201ENSMUST00000197710 3188 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Prdm15-203ENSMUST00000121584 6194 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 A730032A03Rik-202ENSMUST00000143202 1928 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Phactr4-201ENSMUST00000084170 4483 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Eif3l-201ENSMUST00000040518 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Xlr4c-203ENSMUST00000114530 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Mir1190-201ENSMUST00000116925 96 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Mif-ps3-201ENSMUST00000118636 345 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm6806-201ENSMUST00000120092 1006 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 3110056K07Rik-201ENSMUST00000127129 722 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm25694-201ENSMUST00000175448 282 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Mir6981-201ENSMUST00000184293 115 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm2324-201ENSMUST00000187464 662 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm5960-201ENSMUST00000188483 406 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm38103-201ENSMUST00000191707 864 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm8826-201ENSMUST00000193161 948 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm43382-201ENSMUST00000198954 838 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm43610-201ENSMUST00000199117 365 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm33242-201ENSMUST00000212130 1057 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm45908-201ENSMUST00000212977 1177 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Rnf212b-201ENSMUST00000218311 1201 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 AC166830.1-201ENSMUST00000224201 533 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Ermard-210ENSMUST00000226599 788 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Apoc3-201ENSMUST00000034586 526 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 CT025618.1-202ENSMUST00000226439 1758 ntBASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Rgs12-206ENSMUST00000114284 3624 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Tifab-201ENSMUST00000169652 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm3455-201ENSMUST00000204812 1954 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Gm6116-201ENSMUST00000101121 1437 ntTSL 2 BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 AI182371-206ENSMUST00000226631 1680 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Trim39Q9ESN2 Pla2g2c-202ENSMUST00000105808 3448 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Ctss-202ENSMUST00000116304 1355 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm43376-201ENSMUST00000198939 1887 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Agtr1b-201ENSMUST00000068316 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm42866-201ENSMUST00000195919 3304 ntBASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Ndrg3-203ENSMUST00000109558 4023 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trim39Q9ESN2 Gm5583-201ENSMUST00000174328 1519 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms