Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm21542-201ENSMUST00000182307 993 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm27383-201ENSMUST00000184418 361 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Mir8104-201ENSMUST00000185165 101 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm2021-201ENSMUST00000190623 464 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm37328-201ENSMUST00000193191 640 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm5845-201ENSMUST00000195812 796 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm8115-201ENSMUST00000197137 736 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm4410-201ENSMUST00000199349 686 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm9273-201ENSMUST00000200606 715 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Sycp3-201ENSMUST00000020252 1139 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm39481-201ENSMUST00000210379 512 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm19137-201ENSMUST00000213790 1164 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm19987-201ENSMUST00000216339 499 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm8435-201ENSMUST00000219481 792 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm17820-201ENSMUST00000220213 1068 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 AC154548.2-201ENSMUST00000224621 469 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 AC118704.1-201ENSMUST00000225022 695 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 AC121997.1-201ENSMUST00000226423 793 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 AC122251.1-201ENSMUST00000227717 639 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 AC140244.1-201ENSMUST00000228454 229 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Olfr545-201ENSMUST00000058750 951 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Olfr1045-201ENSMUST00000099904 948 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 5930403N24Rik-203ENSMUST00000191067 1791 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Ldah-201ENSMUST00000037383 2737 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Camk2a-202ENSMUST00000039904 1734 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Lrrc2-201ENSMUST00000035076 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gpbp1-201ENSMUST00000047627 3694 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Sec31a-210ENSMUST00000182886 4047 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Txndc16-201ENSMUST00000022377 4028 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Gm37694-201ENSMUST00000191696 2133 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 P2rx2-206ENSMUST00000200214 1568 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 AC093043.2-201ENSMUST00000228616 2017 ntBASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 A530076I17Rik-201ENSMUST00000138379 2408 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim39Q9ESN2 Vwa3b-206ENSMUST00000169057 1499 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm43255-201ENSMUST00000198885 1437 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 D830005E20Rik-201ENSMUST00000217716 1844 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Duxbl3-202ENSMUST00000112340 2248 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Duxbl2-202ENSMUST00000172038 2248 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 AC127597.2-201ENSMUST00000223947 2209 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Akr1cl-201ENSMUST00000069142 1761 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Syt11-202ENSMUST00000107503 3575 ntTSL 2 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm17031-201ENSMUST00000016698 1669 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Supt5-201ENSMUST00000003527 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm37647-201ENSMUST00000194556 3143 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm16365-201ENSMUST00000122987 629 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm13053-201ENSMUST00000128385 459 ntTSL 3 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm16304-201ENSMUST00000129972 775 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm9027-201ENSMUST00000165914 661 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm24105-201ENSMUST00000174933 293 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Mir5108-201ENSMUST00000175276 85 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm22396-201ENSMUST00000177110 53 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm24925-201ENSMUST00000178157 107 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm26590-201ENSMUST00000180857 1277 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm8023-201ENSMUST00000195298 903 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm43752-201ENSMUST00000198475 697 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 Gm44173-201ENSMUST00000204316 132 ntBASIC8.38□□□□□ -1.07
Trim39Q9ESN2 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim39Q9ESN2 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms