Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ripor2-203ENSMUST00000091694 3142 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nup88Q8CEC0 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nup88Q8CEC0 C5ar2-202ENSMUST00000171425 3381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nup88Q8CEC0 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Nup88Q8CEC0 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Asic5-202ENSMUST00000107736 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gm37121-201ENSMUST00000192219 2556 ntBASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Wdr12-203ENSMUST00000122038 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gm10364-201ENSMUST00000076633 1328 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 4933427I04Rik-201ENSMUST00000097896 2183 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gm25803-201ENSMUST00000104419 131 ntBASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gm23840-201ENSMUST00000116950 97 ntBASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gm12275-201ENSMUST00000119805 307 ntBASIC9.9□□□□□ -0.82
Nup88Q8CEC0 n-R5s43-201ENSMUST00000122739 110 ntBASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gm25190-201ENSMUST00000176664 95 ntBASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 1110059E24Rik-202ENSMUST00000177577 599 ntTSL 3 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gm37678-201ENSMUST00000192908 1146 ntBASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gm42628-201ENSMUST00000198498 764 ntBASIC9.9□□□□□ -0.82
Nup88Q8CEC0 AC153937.2-202ENSMUST00000219583 670 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 AC140462.1-201ENSMUST00000225776 853 ntBASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Gm7942-201ENSMUST00000163216 1500 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Nup88Q8CEC0 Trps1-205ENSMUST00000183997 3627 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Nup88Q8CEC0 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nup88Q8CEC0 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nup88Q8CEC0 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
Nup88Q8CEC0 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Nup88Q8CEC0 Il1f5-202ENSMUST00000114490 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nup88Q8CEC0 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nup88Q8CEC0 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Nup88Q8CEC0 Il6st-209ENSMUST00000184445 1870 ntTSL 5 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm43322-201ENSMUST00000196232 1612 ntBASIC9.89□□□□□ -0.83
Nup88Q8CEC0 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Mageb2-202ENSMUST00000201779 1551 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm7364-201ENSMUST00000188760 1501 ntBASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Tdpoz1-201ENSMUST00000094413 2237 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm25607-201ENSMUST00000104020 127 ntBASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm15873-201ENSMUST00000123390 761 ntTSL 3 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm22949-201ENSMUST00000158562 105 ntBASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm25770-201ENSMUST00000158566 115 ntBASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm29188-201ENSMUST00000191173 767 ntTSL 3 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Igkv12-42-201ENSMUST00000198769 327 ntBASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm45227-201ENSMUST00000205585 169 ntBASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Olfr721-ps1-202ENSMUST00000206688 1097 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm11149-202ENSMUST00000215070 1169 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Tssk4-207ENSMUST00000228395 1273 ntAPPRIS P5 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Ube2e2-201ENSMUST00000076133 606 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm4149-201ENSMUST00000099371 276 ntBASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gm14668-201ENSMUST00000118588 1724 ntBASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Nup88Q8CEC0 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms