Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Crxos-202ENSMUST00000125993 2246 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Ugt1a1-201ENSMUST00000073049 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 4933433G08Rik-201ENSMUST00000217392 1845 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 4930444M15Rik-201ENSMUST00000181972 1658 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm19114-201ENSMUST00000193972 1357 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm3283-201ENSMUST00000199319 1350 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 AC125487.1-201ENSMUST00000217888 1300 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Car8-201ENSMUST00000066674 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm24048-201ENSMUST00000102411 106 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm26429-201ENSMUST00000104829 110 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Mup9-201ENSMUST00000107506 721 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm15090-201ENSMUST00000118787 1196 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm12855-201ENSMUST00000119357 513 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm13281-201ENSMUST00000120871 567 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm7599-201ENSMUST00000121453 796 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm15089-201ENSMUST00000122332 1196 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Banf2os-201ENSMUST00000124061 771 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Mup9-207ENSMUST00000132829 598 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm16329-201ENSMUST00000148174 371 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 1700031F10Rik-202ENSMUST00000156018 609 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Rit1-207ENSMUST00000172252 820 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm15256-201ENSMUST00000177793 883 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm22254-201ENSMUST00000179186 110 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm7693-201ENSMUST00000183257 988 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm27395-201ENSMUST00000183938 460 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm28384-201ENSMUST00000189079 463 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm37543-201ENSMUST00000192443 1031 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm38051-201ENSMUST00000193740 433 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm43693-201ENSMUST00000196072 1249 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm43245-201ENSMUST00000197603 468 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm43802-201ENSMUST00000197826 637 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm9364-201ENSMUST00000199220 460 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Trav12-4-201ENSMUST00000200663 271 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm44809-201ENSMUST00000208305 993 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm18597-201ENSMUST00000209519 694 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm17911-201ENSMUST00000210806 877 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 AC104906.1-201ENSMUST00000218122 913 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 9330159N22Rik-201ENSMUST00000221530 1031 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm9866-207ENSMUST00000222954 1057 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 AC164297.5-201ENSMUST00000224365 198 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 CT030135.2-201ENSMUST00000225255 893 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Cd2-201ENSMUST00000029456 1153 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Cypt2-201ENSMUST00000041758 697 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm23405-201ENSMUST00000082542 160 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm23458-201ENSMUST00000083257 169 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Mup11-201ENSMUST00000084544 601 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Mup16-201ENSMUST00000095051 721 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 4732419C18Rik-201ENSMUST00000181805 3536 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Abce1-201ENSMUST00000080536 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Pou2f1-216ENSMUST00000184643 2201 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Ccdc15-201ENSMUST00000037275 3525 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Gm43618-201ENSMUST00000197392 3451 ntBASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Rasgef1c-201ENSMUST00000063444 3378 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Plekha5-206ENSMUST00000203774 1912 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim39Q9ESN2 Apex2-204ENSMUST00000112721 1852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm39459-201ENSMUST00000215662 1895 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Psen1-202ENSMUST00000101225 3023 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Grm8-201ENSMUST00000090512 2830 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm7648-201ENSMUST00000173036 1658 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm37902-201ENSMUST00000192839 1683 ntBASIC8.4□□□□□ -1.06
Trim39Q9ESN2 4930534H03Rik-201ENSMUST00000216311 1669 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Akr1cl-206ENSMUST00000162800 1628 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Mterf2-201ENSMUST00000050813 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Tango2-201ENSMUST00000115628 1507 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim39Q9ESN2 Vmn2r-ps53-201ENSMUST00000173045 2353 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms