Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Ctla4-201ENSMUST00000027164 1933 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim39Q9ESN2 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Trim39Q9ESN2 Gm10069-201ENSMUST00000144745 3694 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim39Q9ESN2 Gls-203ENSMUST00000114512 2042 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Trim39Q9ESN2 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.44□□□□□ -1.06
Trim39Q9ESN2 AC130831.1-201ENSMUST00000224546 1474 ntBASIC8.44□□□□□ -1.06
Trim39Q9ESN2 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC8.44□□□□□ -1.06
Trim39Q9ESN2 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim39Q9ESN2 Map4k4-209ENSMUST00000192509 3918 ntAPPRIS P3 TSL 2 BASIC8.44□□□□□ -1.06
Trim39Q9ESN2 Ablim1-205ENSMUST00000111526 2164 ntTSL 5 BASIC8.44□□□□□ -1.06
Trim39Q9ESN2 Zfp410-203ENSMUST00000220931 1569 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Trim39Q9ESN2 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 E330012B07Rik-202ENSMUST00000151979 2349 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 A430033K04Rik-202ENSMUST00000069862 3038 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Ddx39-206ENSMUST00000172396 3836 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Dcstamp-203ENSMUST00000227368 1825 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm20045-201ENSMUST00000192658 5577 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Cxcl2-202ENSMUST00000200681 1859 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 AC156273.1-201ENSMUST00000214570 2762 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Kcnab2-205ENSMUST00000159840 3574 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Bves-201ENSMUST00000095715 4368 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 AC122397.1-201ENSMUST00000228650 2819 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Nr2e1-202ENSMUST00000105498 780 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Cks1b-202ENSMUST00000107422 766 ntTSL 2 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm12072-201ENSMUST00000118293 715 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm6341-201ENSMUST00000119683 411 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm8163-201ENSMUST00000122020 1060 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm15499-201ENSMUST00000141390 422 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Halr1-202ENSMUST00000155758 408 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm25394-201ENSMUST00000157338 133 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm25557-201ENSMUST00000158084 315 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm27755-201ENSMUST00000184623 132 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm20819-201ENSMUST00000191091 925 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm38086-201ENSMUST00000193543 434 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm36973-201ENSMUST00000193942 259 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm15860-203ENSMUST00000197262 360 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm42779-201ENSMUST00000198807 406 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm4602-201ENSMUST00000203198 308 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 1810059H22Rik-202ENSMUST00000203662 546 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm44988-201ENSMUST00000203835 1161 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm18538-201ENSMUST00000204265 484 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm45225-201ENSMUST00000206852 1139 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 AC118222.1-201ENSMUST00000222184 2973 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 AC129019.1-201ENSMUST00000223463 410 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 AC124555.1-201ENSMUST00000227051 880 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 AC158122.1-201ENSMUST00000227398 673 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 AC116390.1-201ENSMUST00000227975 670 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 AC154692.1-201ENSMUST00000228314 544 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Ly6g5b-201ENSMUST00000062657 1046 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Cnfn-201ENSMUST00000076276 524 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Tac1-201ENSMUST00000090679 980 ntTSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Mcf2l-201ENSMUST00000095456 3926 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Tmem144-202ENSMUST00000168038 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 AC117608.2-201ENSMUST00000224124 1363 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Sdcbp2-201ENSMUST00000028950 1399 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Kcns3-202ENSMUST00000164495 2332 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Parva-202ENSMUST00000106640 1465 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Lmntd1-202ENSMUST00000111708 1559 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Trim39Q9ESN2 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms