Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12728V9GX31 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Gm14117-201ENSMUST00000122417 843 ntBASIC15.15■□□□□ 0.02
Gm12728V9GX31 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12728V9GX31 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Gm12728V9GX31 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.15■□□□□ 0.02
Gm12728V9GX31 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm12728V9GX31 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.14■□□□□ 0.01
Gm12728V9GX31 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12728V9GX31 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Gm12728V9GX31 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.13■□□□□ 0.01
Gm12728V9GX31 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12728V9GX31 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12728V9GX31 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12728V9GX31 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12728V9GX31 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Gm12728V9GX31 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12728V9GX31 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm12728V9GX31 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12728V9GX31 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12728V9GX31 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12728V9GX31 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12728V9GX31 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12728V9GX31 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12728V9GX31 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12728V9GX31 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.12■□□□□ 0.01
Gm12728V9GX31 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12728V9GX31 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12728V9GX31 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12728V9GX31 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12728V9GX31 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Gm12728V9GX31 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm12728V9GX31 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12728V9GX31 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.11■□□□□ 0.01
Gm12728V9GX31 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm12728V9GX31 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm12728V9GX31 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm12728V9GX31 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm12728V9GX31 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm12728V9GX31 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms