Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
H2afb2S4R1M3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
H2afb2S4R1M3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
H2afb2S4R1M3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb2S4R1M3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
H2afb2S4R1M3 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
H2afb2S4R1M3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Gm38205-201ENSMUST00000192243 258 ntBASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb2S4R1M3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.84■□□□□ 0.61
H2afb2S4R1M3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb2S4R1M3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb2S4R1M3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb2S4R1M3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb2S4R1M3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
H2afb2S4R1M3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb2S4R1M3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb2S4R1M3 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.84■□□□□ 0.61
H2afb2S4R1M3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb2S4R1M3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.84■□□□□ 0.61
H2afb2S4R1M3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb2S4R1M3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb2S4R1M3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
H2afb2S4R1M3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
H2afb2S4R1M3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms