Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ClcnkaQ9WUB7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.33■□□□□ 0.36
ClcnkaQ9WUB7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ClcnkaQ9WUB7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ClcnkaQ9WUB7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.33■□□□□ 0.36
ClcnkaQ9WUB7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ClcnkaQ9WUB7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
ClcnkaQ9WUB7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ClcnkaQ9WUB7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClcnkaQ9WUB7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ClcnkaQ9WUB7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ClcnkaQ9WUB7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ClcnkaQ9WUB7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ClcnkaQ9WUB7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClcnkaQ9WUB7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClcnkaQ9WUB7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ClcnkaQ9WUB7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
ClcnkaQ9WUB7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClcnkaQ9WUB7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ClcnkaQ9WUB7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.29■□□□□ 0.36
ClcnkaQ9WUB7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
ClcnkaQ9WUB7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ClcnkaQ9WUB7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ClcnkaQ9WUB7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ClcnkaQ9WUB7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
ClcnkaQ9WUB7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.28■□□□□ 0.36
ClcnkaQ9WUB7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClcnkaQ9WUB7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.28■□□□□ 0.36
ClcnkaQ9WUB7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClcnkaQ9WUB7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ClcnkaQ9WUB7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ClcnkaQ9WUB7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ClcnkaQ9WUB7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ClcnkaQ9WUB7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ClcnkaQ9WUB7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ClcnkaQ9WUB7 BC021767-201ENSMUST00000126387 1716 ntBASIC17.27■□□□□ 0.35
ClcnkaQ9WUB7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms