Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scn8aQ9WTU3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn8aQ9WTU3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn8aQ9WTU3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Scn8aQ9WTU3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn8aQ9WTU3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn8aQ9WTU3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.16■□□□□ 0.66
Scn8aQ9WTU3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scn8aQ9WTU3 Gm5408-201ENSMUST00000197998 747 ntBASIC19.15■□□□□ 0.66
Scn8aQ9WTU3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn8aQ9WTU3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Scn8aQ9WTU3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn8aQ9WTU3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.15■□□□□ 0.66
Scn8aQ9WTU3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.15■□□□□ 0.66
Scn8aQ9WTU3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Scn8aQ9WTU3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn8aQ9WTU3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scn8aQ9WTU3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scn8aQ9WTU3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.14■□□□□ 0.65
Scn8aQ9WTU3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn8aQ9WTU3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn8aQ9WTU3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn8aQ9WTU3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn8aQ9WTU3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn8aQ9WTU3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn8aQ9WTU3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn8aQ9WTU3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn8aQ9WTU3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn8aQ9WTU3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.13■□□□□ 0.65
Scn8aQ9WTU3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.13■□□□□ 0.65
Scn8aQ9WTU3 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.13■□□□□ 0.65
Scn8aQ9WTU3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.12■□□□□ 0.65
Scn8aQ9WTU3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn8aQ9WTU3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn8aQ9WTU3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn8aQ9WTU3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn8aQ9WTU3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn8aQ9WTU3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn8aQ9WTU3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn8aQ9WTU3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn8aQ9WTU3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn8aQ9WTU3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn8aQ9WTU3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Scn8aQ9WTU3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Scn8aQ9WTU3 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.1■□□□□ 0.65
Scn8aQ9WTU3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Scn8aQ9WTU3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.1■□□□□ 0.65
Scn8aQ9WTU3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn8aQ9WTU3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn8aQ9WTU3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn8aQ9WTU3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn8aQ9WTU3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn8aQ9WTU3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn8aQ9WTU3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.09■□□□□ 0.65
Scn8aQ9WTU3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn8aQ9WTU3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.09■□□□□ 0.65
Scn8aQ9WTU3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.09■□□□□ 0.65
Scn8aQ9WTU3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scn8aQ9WTU3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scn8aQ9WTU3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Scn8aQ9WTU3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Scn8aQ9WTU3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scn8aQ9WTU3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scn8aQ9WTU3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.08■□□□□ 0.65
Scn8aQ9WTU3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn8aQ9WTU3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Scn8aQ9WTU3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.08■□□□□ 0.64
Scn8aQ9WTU3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn8aQ9WTU3 Rab3c-203ENSMUST00000224180 967 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms