Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek3Q9R0A5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek3Q9R0A5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek3Q9R0A5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nek3Q9R0A5 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.72■□□□□ 0.91
Nek3Q9R0A5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek3Q9R0A5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek3Q9R0A5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nek3Q9R0A5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek3Q9R0A5 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.72■□□□□ 0.91
Nek3Q9R0A5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nek3Q9R0A5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nek3Q9R0A5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Nek3Q9R0A5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Nek3Q9R0A5 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.71■□□□□ 0.91
Nek3Q9R0A5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nek3Q9R0A5 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nek3Q9R0A5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Nek3Q9R0A5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.71■□□□□ 0.91
Nek3Q9R0A5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nek3Q9R0A5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nek3Q9R0A5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nek3Q9R0A5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nek3Q9R0A5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nek3Q9R0A5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nek3Q9R0A5 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.69■□□□□ 0.9
Nek3Q9R0A5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek3Q9R0A5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek3Q9R0A5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.69■□□□□ 0.9
Nek3Q9R0A5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek3Q9R0A5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek3Q9R0A5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nek3Q9R0A5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek3Q9R0A5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nek3Q9R0A5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek3Q9R0A5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek3Q9R0A5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nek3Q9R0A5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek3Q9R0A5 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.68■□□□□ 0.9
Nek3Q9R0A5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
Nek3Q9R0A5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nek3Q9R0A5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nek3Q9R0A5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek3Q9R0A5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nek3Q9R0A5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek3Q9R0A5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek3Q9R0A5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek3Q9R0A5 Gm12251-201ENSMUST00000117893 792 ntBASIC20.67■□□□□ 0.9
Nek3Q9R0A5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.67■□□□□ 0.9
Nek3Q9R0A5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nek3Q9R0A5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nek3Q9R0A5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.67■□□□□ 0.9
Nek3Q9R0A5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek3Q9R0A5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek3Q9R0A5 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.67■□□□□ 0.9
Nek3Q9R0A5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek3Q9R0A5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.67■□□□□ 0.9
Nek3Q9R0A5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nek3Q9R0A5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Gm7860-201ENSMUST00000121190 879 ntBASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nek3Q9R0A5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek3Q9R0A5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nek3Q9R0A5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek3Q9R0A5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek3Q9R0A5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Nek3Q9R0A5 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.65■□□□□ 0.9
Nek3Q9R0A5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nek3Q9R0A5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Nek3Q9R0A5 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.65■□□□□ 0.9
Nek3Q9R0A5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Nek3Q9R0A5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nek3Q9R0A5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nek3Q9R0A5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms