Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 Gm13158-201ENSMUST00000122007 736 ntBASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Scn5aQ9JJV9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn5aQ9JJV9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn5aQ9JJV9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn5aQ9JJV9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn5aQ9JJV9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn5aQ9JJV9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn5aQ9JJV9 Mir1199-201ENSMUST00000117015 119 ntBASIC19.67■□□□□ 0.74
Scn5aQ9JJV9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Scn5aQ9JJV9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.67■□□□□ 0.74
Scn5aQ9JJV9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn5aQ9JJV9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn5aQ9JJV9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Scn5aQ9JJV9 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.67■□□□□ 0.74
Scn5aQ9JJV9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Scn5aQ9JJV9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn5aQ9JJV9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn5aQ9JJV9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.66■□□□□ 0.74
Scn5aQ9JJV9 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.66■□□□□ 0.74
Scn5aQ9JJV9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
Scn5aQ9JJV9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.66■□□□□ 0.74
Scn5aQ9JJV9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Scn5aQ9JJV9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Scn5aQ9JJV9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.66■□□□□ 0.74
Scn5aQ9JJV9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.66■□□□□ 0.74
Scn5aQ9JJV9 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.66■□□□□ 0.74
Scn5aQ9JJV9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Scn5aQ9JJV9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn5aQ9JJV9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn5aQ9JJV9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Scn5aQ9JJV9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.65■□□□□ 0.74
Scn5aQ9JJV9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Scn5aQ9JJV9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn5aQ9JJV9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Scn5aQ9JJV9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.64■□□□□ 0.74
Scn5aQ9JJV9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Scn5aQ9JJV9 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.64■□□□□ 0.74
Scn5aQ9JJV9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Scn5aQ9JJV9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn5aQ9JJV9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn5aQ9JJV9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn5aQ9JJV9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Scn5aQ9JJV9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn5aQ9JJV9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Scn5aQ9JJV9 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.64■□□□□ 0.73
Scn5aQ9JJV9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn5aQ9JJV9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn5aQ9JJV9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Scn5aQ9JJV9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn5aQ9JJV9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn5aQ9JJV9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.63■□□□□ 0.73
Scn5aQ9JJV9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn5aQ9JJV9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn5aQ9JJV9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Scn5aQ9JJV9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn5aQ9JJV9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Scn5aQ9JJV9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn5aQ9JJV9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn5aQ9JJV9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn5aQ9JJV9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn5aQ9JJV9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Scn5aQ9JJV9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn5aQ9JJV9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn5aQ9JJV9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Scn5aQ9JJV9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn5aQ9JJV9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Scn5aQ9JJV9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn5aQ9JJV9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn5aQ9JJV9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.61■□□□□ 0.73
Scn5aQ9JJV9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn5aQ9JJV9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn5aQ9JJV9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Scn5aQ9JJV9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.61■□□□□ 0.73
Scn5aQ9JJV9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Scn5aQ9JJV9 Gm15378-201ENSMUST00000121894 207 ntBASIC19.6■□□□□ 0.73
Scn5aQ9JJV9 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.6■□□□□ 0.73
Scn5aQ9JJV9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Scn5aQ9JJV9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn5aQ9JJV9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Scn5aQ9JJV9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms