Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.68■□□□□ 0.1
Herpud1Q9JJK5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 BC021767-201ENSMUST00000126387 1716 ntBASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Herpud1Q9JJK5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Herpud1Q9JJK5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Herpud1Q9JJK5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Herpud1Q9JJK5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Herpud1Q9JJK5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Herpud1Q9JJK5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Herpud1Q9JJK5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Herpud1Q9JJK5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Herpud1Q9JJK5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Herpud1Q9JJK5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Herpud1Q9JJK5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Herpud1Q9JJK5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Herpud1Q9JJK5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.62■□□□□ 0.09
Herpud1Q9JJK5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Herpud1Q9JJK5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms