Protein–RNA interactions for Protein: Q9JJI8

Rpl38, 60S ribosomal protein L38, mousemouse

Known RBP Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl38Q9JJI8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl38Q9JJI8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl38Q9JJI8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Rpl38Q9JJI8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl38Q9JJI8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl38Q9JJI8 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.21■□□□□ 0.51
Rpl38Q9JJI8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl38Q9JJI8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Rpl38Q9JJI8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Rpl38Q9JJI8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl38Q9JJI8 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.19■□□□□ 0.5
Rpl38Q9JJI8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl38Q9JJI8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl38Q9JJI8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl38Q9JJI8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rpl38Q9JJI8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.19■□□□□ 0.5
Rpl38Q9JJI8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rpl38Q9JJI8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Rpl38Q9JJI8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpl38Q9JJI8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Rpl38Q9JJI8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpl38Q9JJI8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.17■□□□□ 0.5
Rpl38Q9JJI8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 Mir7075-201ENSMUST00000184187 82 ntBASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpl38Q9JJI8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl38Q9JJI8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl38Q9JJI8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl38Q9JJI8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl38Q9JJI8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.15■□□□□ 0.5
Rpl38Q9JJI8 Gm11421-201ENSMUST00000122124 294 ntBASIC18.15■□□□□ 0.5
Rpl38Q9JJI8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.15■□□□□ 0.5
Rpl38Q9JJI8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.15■□□□□ 0.5
Rpl38Q9JJI8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rpl38Q9JJI8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl38Q9JJI8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpl38Q9JJI8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Rpl38Q9JJI8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpl38Q9JJI8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl38Q9JJI8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl38Q9JJI8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl38Q9JJI8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.14■□□□□ 0.49
Rpl38Q9JJI8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.14■□□□□ 0.49
Rpl38Q9JJI8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl38Q9JJI8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.14■□□□□ 0.49
Rpl38Q9JJI8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpl38Q9JJI8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms