Protein–RNA interactions for Protein: Q9ESX4

Zcchc17, Nucleolar protein of 40 kDa, mousemouse

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc17Q9ESX4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Zcchc17Q9ESX4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Zcchc17Q9ESX4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Zcchc17Q9ESX4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Zcchc17Q9ESX4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
Zcchc17Q9ESX4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
Zcchc17Q9ESX4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zcchc17Q9ESX4 Gm11643-201ENSMUST00000119578 864 ntBASIC22.26■■□□□ 1.15
Zcchc17Q9ESX4 Gm44549-201ENSMUST00000208351 577 ntBASIC22.26■■□□□ 1.15
Zcchc17Q9ESX4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Zcchc17Q9ESX4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC22.26■■□□□ 1.15
Zcchc17Q9ESX4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zcchc17Q9ESX4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zcchc17Q9ESX4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zcchc17Q9ESX4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 AL672049.1-201ENSMUST00000197943 91 ntBASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zcchc17Q9ESX4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zcchc17Q9ESX4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zcchc17Q9ESX4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
Zcchc17Q9ESX4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC22.24■■□□□ 1.15
Zcchc17Q9ESX4 AC153881.1-201ENSMUST00000214448 284 ntBASIC22.24■■□□□ 1.15
Zcchc17Q9ESX4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC22.24■■□□□ 1.15
Zcchc17Q9ESX4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zcchc17Q9ESX4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zcchc17Q9ESX4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.24■■□□□ 1.15
Zcchc17Q9ESX4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zcchc17Q9ESX4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zcchc17Q9ESX4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Zcchc17Q9ESX4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zcchc17Q9ESX4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.23■■□□□ 1.15
Zcchc17Q9ESX4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zcchc17Q9ESX4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zcchc17Q9ESX4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zcchc17Q9ESX4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Zcchc17Q9ESX4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zcchc17Q9ESX4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Zcchc17Q9ESX4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 Gm11249-201ENSMUST00000117071 859 ntBASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Zcchc17Q9ESX4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Zcchc17Q9ESX4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Zcchc17Q9ESX4 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Zcchc17Q9ESX4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Zcchc17Q9ESX4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.21■■□□□ 1.15
Zcchc17Q9ESX4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Zcchc17Q9ESX4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Zcchc17Q9ESX4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.21■■□□□ 1.15
Zcchc17Q9ESX4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Zcchc17Q9ESX4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Zcchc17Q9ESX4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Zcchc17Q9ESX4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.21■■□□□ 1.15
Zcchc17Q9ESX4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Mir1199-201ENSMUST00000117015 119 ntBASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Gm15378-201ENSMUST00000121894 207 ntBASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Gm10698-201ENSMUST00000182663 604 ntBASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Nrn1-203ENSMUST00000223611 1443 ntBASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Zcchc17Q9ESX4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Zcchc17Q9ESX4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Zcchc17Q9ESX4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Zcchc17Q9ESX4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Zcchc17Q9ESX4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC22.19■■□□□ 1.14
Zcchc17Q9ESX4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms