Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm20760-201ENSMUST00000179197 648 ntBASIC26.35■■□□□ 1.81
Cpsf1Q9EPU4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC26.35■■□□□ 1.81
Cpsf1Q9EPU4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Cpsf1Q9EPU4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cpsf1Q9EPU4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cpsf1Q9EPU4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cpsf1Q9EPU4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cpsf1Q9EPU4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC26.34■■□□□ 1.81
Cpsf1Q9EPU4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cpsf1Q9EPU4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cpsf1Q9EPU4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cpsf1Q9EPU4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cpsf1Q9EPU4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cpsf1Q9EPU4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cpsf1Q9EPU4 Gm13509-201ENSMUST00000119733 1308 ntBASIC26.33■■□□□ 1.81
Cpsf1Q9EPU4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cpsf1Q9EPU4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC26.32■■□□□ 1.8
Cpsf1Q9EPU4 Gm5408-201ENSMUST00000197998 747 ntBASIC26.32■■□□□ 1.8
Cpsf1Q9EPU4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC26.32■■□□□ 1.8
Cpsf1Q9EPU4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC26.32■■□□□ 1.8
Cpsf1Q9EPU4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Cpsf1Q9EPU4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cpsf1Q9EPU4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cpsf1Q9EPU4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cpsf1Q9EPU4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cpsf1Q9EPU4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC26.3■■□□□ 1.8
Cpsf1Q9EPU4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC26.3■■□□□ 1.8
Cpsf1Q9EPU4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Cpsf1Q9EPU4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cpsf1Q9EPU4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC26.3■■□□□ 1.8
Cpsf1Q9EPU4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cpsf1Q9EPU4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 Rab3c-203ENSMUST00000224180 967 ntBASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Cpsf1Q9EPU4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cpsf1Q9EPU4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Cpsf1Q9EPU4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Cpsf1Q9EPU4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cpsf1Q9EPU4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cpsf1Q9EPU4 Gm43545-201ENSMUST00000196765 2779 ntBASIC26.28■■□□□ 1.8
Cpsf1Q9EPU4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cpsf1Q9EPU4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cpsf1Q9EPU4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Cpsf1Q9EPU4 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cpsf1Q9EPU4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC26.27■■□□□ 1.8
Cpsf1Q9EPU4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cpsf1Q9EPU4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Cpsf1Q9EPU4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC26.27■■□□□ 1.8
Cpsf1Q9EPU4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC26.27■■□□□ 1.8
Cpsf1Q9EPU4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cpsf1Q9EPU4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
Cpsf1Q9EPU4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
Cpsf1Q9EPU4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.8
Cpsf1Q9EPU4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cpsf1Q9EPU4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cpsf1Q9EPU4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC26.26■■□□□ 1.79
Cpsf1Q9EPU4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cpsf1Q9EPU4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cpsf1Q9EPU4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cpsf1Q9EPU4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
Cpsf1Q9EPU4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Cpsf1Q9EPU4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Cpsf1Q9EPU4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Cpsf1Q9EPU4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Cpsf1Q9EPU4 Gm37856-201ENSMUST00000191634 999 ntBASIC26.25■■□□□ 1.79
Cpsf1Q9EPU4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cpsf1Q9EPU4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cpsf1Q9EPU4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC26.25■■□□□ 1.79
Cpsf1Q9EPU4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Cpsf1Q9EPU4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cpsf1Q9EPU4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Cpsf1Q9EPU4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cpsf1Q9EPU4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Cpsf1Q9EPU4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cpsf1Q9EPU4 Gm8309-201ENSMUST00000206627 1448 ntBASIC26.24■■□□□ 1.79
Cpsf1Q9EPU4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cpsf1Q9EPU4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms