Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rrp8Q9DB85 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rrp8Q9DB85 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.53■□□□□ 0.56
Rrp8Q9DB85 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rrp8Q9DB85 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rrp8Q9DB85 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rrp8Q9DB85 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rrp8Q9DB85 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rrp8Q9DB85 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
Rrp8Q9DB85 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.52■□□□□ 0.56
Rrp8Q9DB85 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rrp8Q9DB85 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rrp8Q9DB85 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rrp8Q9DB85 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rrp8Q9DB85 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.52■□□□□ 0.56
Rrp8Q9DB85 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rrp8Q9DB85 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.51■□□□□ 0.55
Rrp8Q9DB85 Gm5643-201ENSMUST00000117081 966 ntBASIC18.51■□□□□ 0.55
Rrp8Q9DB85 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rrp8Q9DB85 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rrp8Q9DB85 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rrp8Q9DB85 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.51■□□□□ 0.55
Rrp8Q9DB85 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rrp8Q9DB85 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rrp8Q9DB85 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rrp8Q9DB85 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rrp8Q9DB85 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.51■□□□□ 0.55
Rrp8Q9DB85 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rrp8Q9DB85 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rrp8Q9DB85 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rrp8Q9DB85 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.5■□□□□ 0.55
Rrp8Q9DB85 Gm6576-201ENSMUST00000169678 883 ntBASIC18.5■□□□□ 0.55
Rrp8Q9DB85 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.5■□□□□ 0.55
Rrp8Q9DB85 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.5■□□□□ 0.55
Rrp8Q9DB85 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rrp8Q9DB85 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.5■□□□□ 0.55
Rrp8Q9DB85 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rrp8Q9DB85 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rrp8Q9DB85 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rrp8Q9DB85 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.49■□□□□ 0.55
Rrp8Q9DB85 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rrp8Q9DB85 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rrp8Q9DB85 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.48■□□□□ 0.55
Rrp8Q9DB85 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.48■□□□□ 0.55
Rrp8Q9DB85 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rrp8Q9DB85 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rrp8Q9DB85 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rrp8Q9DB85 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rrp8Q9DB85 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rrp8Q9DB85 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Dio3-201ENSMUST00000097228 1449 ntBASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rrp8Q9DB85 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rrp8Q9DB85 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Rrp8Q9DB85 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rrp8Q9DB85 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms