Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Echdc3Q9D7J9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Echdc3Q9D7J9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Echdc3Q9D7J9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Echdc3Q9D7J9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Echdc3Q9D7J9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Echdc3Q9D7J9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Echdc3Q9D7J9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Echdc3Q9D7J9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Echdc3Q9D7J9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Echdc3Q9D7J9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Echdc3Q9D7J9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Echdc3Q9D7J9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Echdc3Q9D7J9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Echdc3Q9D7J9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Echdc3Q9D7J9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.33■□□□□ 0.52
Echdc3Q9D7J9 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Echdc3Q9D7J9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Echdc3Q9D7J9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Echdc3Q9D7J9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Echdc3Q9D7J9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Echdc3Q9D7J9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Echdc3Q9D7J9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Echdc3Q9D7J9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Echdc3Q9D7J9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Echdc3Q9D7J9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.3■□□□□ 0.52
Echdc3Q9D7J9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Echdc3Q9D7J9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Echdc3Q9D7J9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Echdc3Q9D7J9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Echdc3Q9D7J9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Gm13241-201ENSMUST00000094493 780 ntBASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Echdc3Q9D7J9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms