Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tube1Q9D6T1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tube1Q9D6T1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Tube1Q9D6T1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Tube1Q9D6T1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tube1Q9D6T1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tube1Q9D6T1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tube1Q9D6T1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tube1Q9D6T1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Tube1Q9D6T1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tube1Q9D6T1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tube1Q9D6T1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tube1Q9D6T1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Tube1Q9D6T1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tube1Q9D6T1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tube1Q9D6T1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tube1Q9D6T1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tube1Q9D6T1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21■□□□□ 0.95
Tube1Q9D6T1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Tube1Q9D6T1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tube1Q9D6T1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Tube1Q9D6T1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tube1Q9D6T1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21■□□□□ 0.95
Tube1Q9D6T1 Gm7514-201ENSMUST00000209475 934 ntBASIC21■□□□□ 0.95
Tube1Q9D6T1 CT030146.1-201ENSMUST00000220919 217 ntBASIC21■□□□□ 0.95
Tube1Q9D6T1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Tube1Q9D6T1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tube1Q9D6T1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Tube1Q9D6T1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Tube1Q9D6T1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tube1Q9D6T1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tube1Q9D6T1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tube1Q9D6T1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tube1Q9D6T1 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.99■□□□□ 0.95
Tube1Q9D6T1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tube1Q9D6T1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.99■□□□□ 0.95
Tube1Q9D6T1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.99■□□□□ 0.95
Tube1Q9D6T1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.99■□□□□ 0.95
Tube1Q9D6T1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tube1Q9D6T1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tube1Q9D6T1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.99■□□□□ 0.95
Tube1Q9D6T1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Tube1Q9D6T1 Gm10602-201ENSMUST00000098239 609 ntBASIC20.98■□□□□ 0.95
Tube1Q9D6T1 BC021767-201ENSMUST00000126387 1716 ntBASIC20.98■□□□□ 0.95
Tube1Q9D6T1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Gm12933-201ENSMUST00000120203 872 ntBASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tube1Q9D6T1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tube1Q9D6T1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tube1Q9D6T1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Tube1Q9D6T1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tube1Q9D6T1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tube1Q9D6T1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tube1Q9D6T1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tube1Q9D6T1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tube1Q9D6T1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.95■□□□□ 0.95
Tube1Q9D6T1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tube1Q9D6T1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tube1Q9D6T1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Tube1Q9D6T1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.94■□□□□ 0.94
Tube1Q9D6T1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tube1Q9D6T1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tube1Q9D6T1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tube1Q9D6T1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tube1Q9D6T1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.93■□□□□ 0.94
Tube1Q9D6T1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Tube1Q9D6T1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Tube1Q9D6T1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Tube1Q9D6T1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Tube1Q9D6T1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Tube1Q9D6T1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tube1Q9D6T1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tube1Q9D6T1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms