Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1aQ9D132 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk1aQ9D132 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk1aQ9D132 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.94■□□□□ 0.46
Upk1aQ9D132 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk1aQ9D132 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Upk1aQ9D132 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Upk1aQ9D132 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upk1aQ9D132 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upk1aQ9D132 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upk1aQ9D132 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.93■□□□□ 0.46
Upk1aQ9D132 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upk1aQ9D132 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upk1aQ9D132 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Upk1aQ9D132 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Upk1aQ9D132 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.92■□□□□ 0.46
Upk1aQ9D132 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.92■□□□□ 0.46
Upk1aQ9D132 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Upk1aQ9D132 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Upk1aQ9D132 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upk1aQ9D132 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Upk1aQ9D132 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Upk1aQ9D132 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.91■□□□□ 0.46
Upk1aQ9D132 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upk1aQ9D132 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.91■□□□□ 0.46
Upk1aQ9D132 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upk1aQ9D132 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Upk1aQ9D132 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Upk1aQ9D132 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Upk1aQ9D132 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Upk1aQ9D132 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk1aQ9D132 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk1aQ9D132 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk1aQ9D132 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Upk1aQ9D132 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk1aQ9D132 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk1aQ9D132 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk1aQ9D132 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.9■□□□□ 0.46
Upk1aQ9D132 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk1aQ9D132 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Upk1aQ9D132 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Upk1aQ9D132 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk1aQ9D132 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Upk1aQ9D132 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk1aQ9D132 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk1aQ9D132 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Upk1aQ9D132 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upk1aQ9D132 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Upk1aQ9D132 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.89■□□□□ 0.45
Upk1aQ9D132 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
Upk1aQ9D132 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.89■□□□□ 0.45
Upk1aQ9D132 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Upk1aQ9D132 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.89■□□□□ 0.45
Upk1aQ9D132 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
Upk1aQ9D132 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Upk1aQ9D132 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upk1aQ9D132 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Upk1aQ9D132 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upk1aQ9D132 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Upk1aQ9D132 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upk1aQ9D132 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Upk1aQ9D132 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upk1aQ9D132 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Upk1aQ9D132 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Upk1aQ9D132 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Upk1aQ9D132 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.88■□□□□ 0.45
Upk1aQ9D132 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Upk1aQ9D132 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.87■□□□□ 0.45
Upk1aQ9D132 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Upk1aQ9D132 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Upk1aQ9D132 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upk1aQ9D132 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upk1aQ9D132 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Upk1aQ9D132 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms