Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chaf1bQ9D0N7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Grk6-206ENSMUST00000224995 2971 ntBASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chaf1bQ9D0N7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chaf1bQ9D0N7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chaf1bQ9D0N7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Chaf1bQ9D0N7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1bQ9D0N7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1bQ9D0N7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1bQ9D0N7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Chaf1bQ9D0N7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1bQ9D0N7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chaf1bQ9D0N7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chaf1bQ9D0N7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chaf1bQ9D0N7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Chaf1bQ9D0N7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1bQ9D0N7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1bQ9D0N7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1bQ9D0N7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1bQ9D0N7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1bQ9D0N7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1bQ9D0N7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1bQ9D0N7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1bQ9D0N7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1bQ9D0N7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1bQ9D0N7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chaf1bQ9D0N7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chaf1bQ9D0N7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chaf1bQ9D0N7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chaf1bQ9D0N7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chaf1bQ9D0N7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chaf1bQ9D0N7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chaf1bQ9D0N7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.69■□□□□ 0.42
Chaf1bQ9D0N7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chaf1bQ9D0N7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chaf1bQ9D0N7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms