Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Snf8Q9CZ28 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snf8Q9CZ28 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.42■□□□□ 0.7
Snf8Q9CZ28 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snf8Q9CZ28 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Snf8Q9CZ28 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snf8Q9CZ28 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Grk6-206ENSMUST00000224995 2971 ntBASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snf8Q9CZ28 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snf8Q9CZ28 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snf8Q9CZ28 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snf8Q9CZ28 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Snf8Q9CZ28 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Snf8Q9CZ28 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.4■□□□□ 0.7
Snf8Q9CZ28 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.4■□□□□ 0.7
Snf8Q9CZ28 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.4■□□□□ 0.7
Snf8Q9CZ28 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.4■□□□□ 0.7
Snf8Q9CZ28 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Snf8Q9CZ28 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.39■□□□□ 0.7
Snf8Q9CZ28 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.39■□□□□ 0.7
Snf8Q9CZ28 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.39■□□□□ 0.69
Snf8Q9CZ28 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snf8Q9CZ28 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Snf8Q9CZ28 Gm12922-201ENSMUST00000120626 809 ntBASIC19.39■□□□□ 0.69
Snf8Q9CZ28 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snf8Q9CZ28 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Snf8Q9CZ28 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snf8Q9CZ28 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.39■□□□□ 0.69
Snf8Q9CZ28 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snf8Q9CZ28 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Snf8Q9CZ28 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.39■□□□□ 0.69
Snf8Q9CZ28 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Snf8Q9CZ28 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Snf8Q9CZ28 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Snf8Q9CZ28 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Snf8Q9CZ28 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Snf8Q9CZ28 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snf8Q9CZ28 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Snf8Q9CZ28 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Snf8Q9CZ28 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.35■□□□□ 0.69
Snf8Q9CZ28 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms