Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.34■□□□□ 0.21
Hcfc1r1Q9CYQ5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hcfc1r1Q9CYQ5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1r1Q9CYQ5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1r1Q9CYQ5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1r1Q9CYQ5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Hcfc1r1Q9CYQ5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hcfc1r1Q9CYQ5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hcfc1r1Q9CYQ5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hcfc1r1Q9CYQ5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1r1Q9CYQ5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1r1Q9CYQ5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1r1Q9CYQ5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Hcfc1r1Q9CYQ5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1r1Q9CYQ5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Hcfc1r1Q9CYQ5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1r1Q9CYQ5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1r1Q9CYQ5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1r1Q9CYQ5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Hcfc1r1Q9CYQ5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Hcfc1r1Q9CYQ5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hcfc1r1Q9CYQ5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hcfc1r1Q9CYQ5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1r1Q9CYQ5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1r1Q9CYQ5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1r1Q9CYQ5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1r1Q9CYQ5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1r1Q9CYQ5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.31■□□□□ 0.2
Hcfc1r1Q9CYQ5 Gm7417-201ENSMUST00000192950 473 ntBASIC16.31■□□□□ 0.2
Hcfc1r1Q9CYQ5 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.31■□□□□ 0.2
Hcfc1r1Q9CYQ5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1r1Q9CYQ5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1r1Q9CYQ5 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hcfc1r1Q9CYQ5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hcfc1r1Q9CYQ5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Gm15820-201ENSMUST00000201566 728 ntBASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hcfc1r1Q9CYQ5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcfc1r1Q9CYQ5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.28■□□□□ 0.2
Hcfc1r1Q9CYQ5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hcfc1r1Q9CYQ5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hcfc1r1Q9CYQ5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hcfc1r1Q9CYQ5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcfc1r1Q9CYQ5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hcfc1r1Q9CYQ5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcfc1r1Q9CYQ5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcfc1r1Q9CYQ5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hcfc1r1Q9CYQ5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hcfc1r1Q9CYQ5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcfc1r1Q9CYQ5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Hcfc1r1Q9CYQ5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.27■□□□□ 0.2
Hcfc1r1Q9CYQ5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Hcfc1r1Q9CYQ5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcfc1r1Q9CYQ5 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.27■□□□□ 0.2
Hcfc1r1Q9CYQ5 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.27■□□□□ 0.2
Hcfc1r1Q9CYQ5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hcfc1r1Q9CYQ5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hcfc1r1Q9CYQ5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hcfc1r1Q9CYQ5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hcfc1r1Q9CYQ5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcfc1r1Q9CYQ5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcfc1r1Q9CYQ5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms