Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lrrc40Q9CRC8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Lrrc40Q9CRC8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lrrc40Q9CRC8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lrrc40Q9CRC8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lrrc40Q9CRC8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lrrc40Q9CRC8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lrrc40Q9CRC8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc40Q9CRC8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Lrrc40Q9CRC8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc40Q9CRC8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc40Q9CRC8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc40Q9CRC8 Gm43060-201ENSMUST00000200621 289 ntBASIC18.72■□□□□ 0.59
Lrrc40Q9CRC8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc40Q9CRC8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc40Q9CRC8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc40Q9CRC8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc40Q9CRC8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc40Q9CRC8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lrrc40Q9CRC8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrc40Q9CRC8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrc40Q9CRC8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lrrc40Q9CRC8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.71■□□□□ 0.59
Lrrc40Q9CRC8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms